UFO12317.5prime Sequence
893 bp (732 high quality bases) assembled on 2012-10-16
> UFO12317.5prime
GTCGACATGTCTGATCGTCGTGGCACAAAAGTTGGAACTGGTACGAAGGC
TTTGGAGTATTGGTGCCGAGTTGTGACCCAAGGATATAATGGGGTCAAGG
TGGAGAACATGACCACTTCCTGGCGAAATGGACTTGCCTTCTGCGCCATA
ATACACCACTTTCGGCCGGATCTTATAGATTTCGACCGACTTAAAGCAGA
CGATATCTATGAGAACAACGATTTGGCCTTTACAACGGCCGAGAAATATT
TGGGAATTCCCGCACTGCTCGATGCAGCTGACATGGTTTCGTATGAAGTA
CCTGATAGACTCTCCATACTAACGTATTTATCCCAGTTTTACAAGGTGCT
CGGCAAGAGCCTGAAGCACCCGAAGCCAGAGGAGCCACTTGGCGAAGAGA
GTGAGCCACCGCAAAAGGTGATGCACATTGTTGGGATGCCTCGACGTGAT
AAGTGCCAGAAATGCAACCTTCCTGTTTTTCTCGCCGAAAGGGTCCTTGT
CGGCAAACGGGCTTATCATCGCACATGCTTAAAATGTGCAAGATGTTCGT
CATTGCTCACACCCCGGGAGTTTTTATGAAACGGAGGTCAATAACATATA
CTGTTGCGAGACTTGTCCCGATGAGAAAGTGAACCCGGATCTGACATTTT
AAAGTTAAAGACACCACTACTGATTCTCCGAATGATAACAAATGGTGCAC
AAAGTTCTGATACTCTGAGCTGAAGATAACAGAGACCTGAGATATGATAT
ACGTACTACTGATAGCTGAACTTCACGCGTCAACAAGATGACAAATATGA
CTACTATATCCGTAAACCCTATATTTATCGAGGAGCGTAAATCTTCTTTT
ATTCCACTAGACGAAGAAGATGGTGCTTATTGACAATATAATA
UFO12317.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:12:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MICAL-like-RA | 3357 | CG11259-RA | 196..1114 | 7..893 | 3680 | 95.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:12:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13014430..13015137 | 711..7 | 3265 | 99 | Minus |
| 3L | 28110227 | 3L | 13014240..13014303 | 875..812 | 215 | 89.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:12:10 has no hits.
UFO12317.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:04 Download gff for
UFO12317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MICAL-like-RA | 166..939 | 1..764 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:47:52 Download gff for
UFO12317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MICAL-like-RA | 191..964 | 1..764 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:53:22 Download gff for
UFO12317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MICAL-like-RA | 191..964 | 1..764 | 97 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:53:22 Download gff for
UFO12317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13014369..13015141 | 1..764 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:47:52 Download gff for
UFO12317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13007469..13008241 | 1..764 | 97 | | Minus |
