UFO12321.5prime Sequence
1000 bp (912 high quality bases) assembled on 2012-10-16
> UFO12321.5prime
AGTCGACATGGCCTCTCAACCGCTTGGACTCCTGCTGGGAGCCATCCTGT
TTTCGATATGCGCAATAGATGCTTCAGTGCCTCATCCTTTGGCGGCCAAC
TATTCGATAGACATCCTGCGACTGGCCAAGGCTGCTCACATCAAAGCCTA
TATGGGCGATGAAAAGGAGCAGGCTTGCAATAATTTCTACAACTATGCCT
GCGCCAATTGGCCTCGTTTGCATCCCGCTCGAAAGTCAAAGACGCGGACC
AACTACCTGGAGGAACTCCAGGAGCTATATATCCGTAAGAGCGCAGATAT
GCTCAAGAGTGCGACCAGAGGAGCTGAGAACAGTGCCGATCGTCAGTTGA
AGTACTTCTATGGATCGTGCCGCCTACAAACAAACGACACGCGATCCGCC
CTGAATACCCTGCAAAATGTGACGGATTTCCGAGGCGGTTGGCCGGAGAT
TCGTGTGGCGTCCTGGTATCAGTACGAGTATGATTGGCTGCAGGTGGTGG
CCAATCTGAAACGCAAGCTTGGCGTGGACATCTTCATCGGACTGGAGGTG
ATACTCGACTACAAGGAGGAGAAGATGCATCGCCTGAAGATCGGTGCACC
ACAGTTTCCCATGTCACGGCGTCACTACTTGCATCCCCACTTCGAAGGAA
CTCGGGAAATCTACGAGCGTTCGATCGAAAATAAGCTGAAATTGTATTTC
CCGGAACAATCGGAACACTGGAGGCAGGAGGTGGCCAGTCAAGTCGTCCA
AATAGAGCAGCAACTGGCCCAAGGGATTGCCTCACAATCCAGCCCTCACC
TTGGCGCAAACCACTCGTCAAAGACCGCGCTGAGATGAAGACTGCCTATG
GTAGCTATGTAGATGTGACCGGTATTTGCATTGATTTTCAACGACACTGT
ACATGGATTTGTATGGAGAAACCCGGAGATAATGTCAATCTGGTGGATGG
TGATAAGGCAAACACCCAAGCTGCAGCTGCAACTATACCAATGTGGAGCT
UFO12321.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:12:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4721-RA | 2213 | CG4721-RA | 71..1067 | 8..997 | 4565 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:12:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22765125..22766102 | 979..8 | 4270 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:12:19 has no hits.
UFO12321.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:07 Download gff for
UFO12321.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4721-RA | 68..1069 | 8..1000 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:47:57 Download gff for
UFO12321.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4721-RA | 68..1069 | 8..1000 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:53:27 Download gff for
UFO12321.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4721-RA | 71..1072 | 8..1000 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:53:27 Download gff for
UFO12321.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22765101..22766102 | 8..1000 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:47:57 Download gff for
UFO12321.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18590823..18591824 | 8..1000 | 97 | | Minus |
