UFO12323.5prime Sequence
858 bp (371 high quality bases) assembled on 2012-10-16
> UFO12323.5prime
AGTCGACATGGACGATCCTCTTAAGCCCAAGCCAGTTCCACTGGCTGCCG
AAACGGTACTGTGGTTCGAGTTCCTGCTCGATCCGCACAAGATTACGCAG
CATCTGCAGCGCCCGCATCCCGAGCCCAGCGCCATGGAGCTGATCGTGCA
GTTCATCAGCATGACGCCGAACACGGCGCAGGAGTCAGTGGGGACGCCTG
GCAGTGATTTGCAGAATCTAAACCAGACGCCATCGAATTCGGGACCCATT
CCCGGGGGGGGTTGGGGGGGGCCCCCTGCGCCGACAACGCCCACTGCCTC
CGGGCGGGAGTGGGGCATGCCCCCATAGCCCACAAAGGCCCCCGCGGAGA
AGGGCCTTGCAAATTGAAACCGCCAAGCAGGTGGGCCACTGAAAAAATCC
TTCGAGCTGAAAGGTAGCCACTTTGGCTTGAAGGTGGGGATCCTGGATGC
AATTGGGAAAAAAGAACCCTGCCCTGTGATTAATGCAGCTTGGGCCTTTG
CCTGCCGCGAATCTTGTGCACACAATAAAGCTTACCGGCCTGGCTTCCTT
TAAGTATTTCCCCCTGGCCCCAATGATTTTTGACGGGGAGGAATTTTCCG
GCTGCCTGGAAAACGAAAAGAAGCAGCCAAGAATTCCGCCCTTTGAACCA
AATAAACCCACCCGCCATGCCTGCCTGCCGAAATGCCAACTTGATTAAAG
GAGAGCAAGGCGTTAAAAAGCCGCCCACGTTCCCTCAAAACAACAATGTT
ACCCAAACTGGTGGAACCAGCCTCCCAGCAGTTTTCTTGGAACACCCCCG
GACTTCAACCATCCCATCGGAGGTTATTTTGCCAACAACTTCTGCCGCCT
CAACTCAT
UFO12323.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:11:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IntS8-RA | 3293 | CG5859-RA | 93..545 | 7..490 | 1615 | 92.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:11:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16850712..16850938 | 122..357 | 765 | 93.2 | Plus |
| 2R | 25286936 | 2R | 16850529..16850644 | 7..122 | 580 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:11:58 has no hits.
UFO12323.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:01 Download gff for
UFO12323.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5859-RA | 67..413 | 1..357 | 95 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:47:43 Download gff for
UFO12323.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IntS8-RA | 88..434 | 1..357 | 95 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:53:15 Download gff for
UFO12323.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IntS8-RA | 88..434 | 1..357 | 95 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:53:15 Download gff for
UFO12323.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16850524..16850644 | 1..122 | 97 | -> | Plus |
| 2R | 16850713..16850938 | 123..357 | 94 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:47:43 Download gff for
UFO12323.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12738029..12738149 | 1..122 | 97 | -> | Plus |
| arm_2R | 12738218..12738443 | 123..357 | 94 | == | Plus |
