Clone UFO12324 Report

Search the DGRC for UFO12324

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:123
Well:24
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG17352-RD
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO12324.5prime Sequence

322 bp (240 high quality bases) assembled on 2012-10-16

> UFO12324.5prime
GTCGACATGGCATATCCACGCGACTATGGTATCGAACACATCCTCACCTG
CGAGGCGGACAACTGCCAGGTGCGTTTGGATTTTACCGACTTCCAGCTGG
GCCTCACCTCCACCCTAGAGATCTTCGACTCCAATGGCCAGATGCTGGAC
TCCTATACGGGTGAGCACTTCCGTCCGCCGATCACGGGTGAGCAGCGGCA
AGTCTCTTGCTCCTGCAGTTTCGAGGAAATTCCGCCACCGGGAGTGGGTT
TTTCGCCGCGGAAGGTTAGCTTTCGTTATCCCTCCAAGCAGCCTCAAGGA
CGAAGCCGAACTGGGTGCCCCT

UFO12324.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:12:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG17352-RE 3223 CG17352-RE 785..1071 7..303 1235 96.6 Plus
CG17352-RA 3160 CG17352-RA 722..1008 7..303 1235 96.6 Plus
CG17352-RB 3174 CG17352-RB 722..1008 7..303 1235 96.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:12:00
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8355208..8355450 252..7 1080 98.8 Minus
Blast to na_te.dros performed on 2014-11-28 18:12:01 has no hits.

UFO12324.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:02 Download gff for UFO12324.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17352-RC 716..1022 1..322 94   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:47:45 Download gff for UFO12324.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17352-RB 716..1022 1..322 94   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:53:17 Download gff for UFO12324.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17352-RB 716..1022 1..322 94   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:53:17 Download gff for UFO12324.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 8355150..8355452 1..322 94   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:47:45 Download gff for UFO12324.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8348250..8348552 1..322 94   Minus