Clone UFO12325 Report

Search the DGRC for UFO12325

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:123
Well:25
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG11417-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO12325.5prime Sequence

271 bp (210 high quality bases) assembled on 2012-10-16

> UFO12325.5prime
AGTCGACATGGGCAAGAAGAAGGACAAGTCCGGGAAGCTGGACAAGCAGA
CGACGAAGAAGGAGGCACCGAGCTCGTCGCAGGCCAACATGGGGAAGGCA
GCTGGAGCCAATGATTCGGAGAACGGAATTTGGCAGGACTCTCGGTTCCA
GCACCTGCTGACCGATCCCCGATTTCGCGGCGTTCCAAAGTGCAGCGAAG
GTCAAGATCGACAGCGTTTCAGGCATGTTCACGGACGACAGTCAGTGAGT
ACACGTGACAGTAGCCGCCGG

UFO12325.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:12:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG11417-RA 2460 CG11417-RA 82..319 8..240 1065 97.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:12:29
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1354095..1354332 8..240 960 97.5 Plus
Blast to na_te.dros performed on 2014-11-28 18:12:30 has no hits.

UFO12325.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:10 Download gff for UFO12325.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11417-RA 47..290 1..240 96   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:48:05 Download gff for UFO12325.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11417-RA 76..319 1..240 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:53:34 Download gff for UFO12325.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11417-RA 76..319 1..240 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:53:34 Download gff for UFO12325.5prime
Subject Subject Range Query Range Percent Splice Strand
X 1354089..1354332 1..240 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:48:05 Download gff for UFO12325.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 1248122..1248365 1..240 96   Plus