UFO12327.5prime Sequence
452 bp (323 high quality bases) assembled on 2012-10-16
> UFO12327.5prime
AGTCGACATGAGTCGCGATAGTGATCCCATGAAATGGTACCACGGCAACC
TGTCCCGCGAGGCAGCCGACGAACTGCTAAAGCAGGGTTACGAGGACGGG
ACATTTCTGGTGCGCGAGAGCAGCACAGCGGCCGGGGACTTTGTGCTGAG
CCTGCTCTGCCAGGGTGAGGTGTGTCACTACCAGGTGCGGCGACATGGCG
GCGAGGACGCCTTCTTCTCCATCGACGACAAGGTACAGACGAAAAATACT
GCACGGCCTGGACCCCGCCTCGTCGACTACTATTCAGCAGGCGGCCAATG
GTCTGCCCACACCAAGGCTGACGGTTGCCCTTGAATCCGCGGGATCTTGC
CCGCCCGCCCCAACCACTTTCGCCAGGCCACACGGAGGTGGACCAAATCT
GGTCTGCATCGCGCGCCCACAAGCCAAAAACAGAGAAGCAAGGGTCGTCT
CT
UFO12327.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:12:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| shark-RA | 3176 | CG18247-RA | 58..382 | 8..341 | 1425 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:12:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16202421..16202641 | 310..86 | 915 | 96.9 | Minus |
| 2R | 25286936 | 2R | 16202747..16202827 | 88..8 | 405 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:12:36 has no hits.
UFO12327.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:11 Download gff for
UFO12327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| shark-RA | 57..385 | 8..347 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:48:08 Download gff for
UFO12327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| shark-RA | 58..386 | 8..347 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:53:39 Download gff for
UFO12327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| shark-RA | 58..386 | 8..347 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:53:39 Download gff for
UFO12327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16202391..16202640 | 87..347 | 95 | <- | Minus |
| 2R | 16202749..16202827 | 8..86 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:48:08 Download gff for
UFO12327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12089896..12090145 | 87..347 | 95 | <- | Minus |
| arm_2R | 12090254..12090332 | 8..86 | 100 | | Minus |
