UFO12328.5prime Sequence
972 bp (878 high quality bases) assembled on 2012-10-16
> UFO12328.5prime
AGTCGACATGGATGCACAGCCGTCGTATCCCGATTTGGCGACCCTGTGCC
GCCTTTGCCTCAAGGAGCACCAGGATGCGTACGCGATCTTCGACGAGGAC
GACACCCAGCTCTCGATACCCGTGCGCCTGATGGCCTGCGTCGCACTGGA
CGCCAAGGCGACGGATACTCTGCCGAAGAGGATCTGCCAGGAGTGCCGCT
ATCAGCTGGAGAAGTCATTCCTGTTCCGGCAGCGCTGCCAATGGGCGGAG
AAGAAGCTTCGCAAGCATATCCGACTTCTGGGTCTCGGGAAGCGAAGCCG
CGTCTTCTCCAAGGATCCGGACGATTATGACGAGGACGAGCTGGAGTTCG
AGGACTCTATTGCCTTCATCGAGGTGCAGGACAAAGTGCGCAAGCTTGAG
GACGAAAAGTGGCGAGAAGATTTTAAGGAAGAACAGGCGGCGGAAATGCA
CAAACGGCTGGTCAAATCTCGTCTAGAACTTCGAGCGAAACTGACCACCG
AACTGCGCAAGGAACTAGCGGAGGAGGTGCGCAGTGAGGTTCGCAAGGAG
CTGGCCGAGGAGGTGCGCAGCCAGGTTAGAGATGACCTGCGAAACGAGGT
GAGCGAGGACATAAGAAAAGAGCAGCTGGCCATGCTGTTGGGCGAATTGG
AGGTGTATCTTACCGAGAAAAGGCCGGTCGGTGGGAGTCTTTGGATGGGT
CCGAACCAGAGACCAAGCCGCAAGTCAAGGAAGATGCCTCCCCTTCTAGG
TCAAAAACTAAAGCTCTTCAAAGCGACGACCCAGCTTGTCGACGCCAATC
TAAAGGCGACGAGGCAGGAGGATGCAAAGAGAGGATTCATATTGGCTGCA
ATACCGACCCGCAAATAATAGCGATGTAAACATAGATGGCTCGACTGACG
AGGATGCCCGCGAAAGCGTGAAGACTCATGCATCAACATGTTGATCGATG
TATGCACAGACATGGAAAGATT
UFO12328.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:12:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31365-RA | 2335 | CG31365-RA | 80..1073 | 7..972 | 4255 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:12:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23125449..23126343 | 890..7 | 3950 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:12:38 has no hits.
UFO12328.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:12 Download gff for
UFO12328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31365-RA | 68..996 | 1..912 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:48:09 Download gff for
UFO12328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31365-RA | 73..1001 | 1..912 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:53:41 Download gff for
UFO12328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31365-RA | 73..1001 | 1..912 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:53:41 Download gff for
UFO12328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23125422..23126348 | 1..912 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:48:09 Download gff for
UFO12328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18951144..18952070 | 1..912 | 97 | | Minus |
