UFO12337.5prime Sequence
854 bp (436 high quality bases) assembled on 2012-10-16
> UFO12337.5prime
AGTCGACATGAACCACCTGCGGGTGCACAAATTCAAGCTGGGCGGCAAAG
ATAATGCCGCCATGGCCGATTTGCCCCAATCGGAAAACACCACCAACAAT
AACAATAATATCGGAAGCAATAATAATCAAAAAGGCGGTGCAAAAGGATT
TCTGGGAAGGATTAAGCGCTACTCAGTGTTGGGAAATAAACTGGGACGTC
GTAATCTCGGCAGTATGAATTTGAATCCGCCGAATAATGTCGTTGATAAT
TCCGTTTCGCCCACTAAACTCCATACTGGAAGCTACAATATGACCGGTAG
CCCATTCCGATGATCATCGCCTGGGAAATCGGAGCTCCGATTTTTAATAT
CCGACTACAACATTGGACACCGAACCGTTTTCGATGTCACGGGAGGGCGA
GACTCAAACAGATTGGGCGGCGGGCATAGCCCCAGAACCTCCCAGTAATA
GTAAAGAACCTCTTGACGCCCAGGAGTTCGGATGAGGAGGAAGTTTGTGG
ACCGCCCAGGAGTATTCCGCCAACAAATGGAAAGGGATGAAGGATCCTGC
AATTCGCTGATGATCAGGTCGAAAAAGAACGATCCGCGATCAGTATGGTC
ATCAATTTCAGCTTTCCTAAGAAAACAACATCGTGAAGAAGAGATGGGGG
AACTTAAAATATCTAGACGATCTGGAGGAACAGACCATTTTGAGACGCCC
AACACGAGTGGAGAAAAGCTCCTGACTGCCAACCAGGATGTGAAGCGCCC
CATACCGCCATACCATTGCATAAGATCCCCCAATCAGACGACCACGTATT
GCCCGCCAGCAAAGGCAATCGCATTCCGTTCAGATCTGCATCGTAGCGAA
CTGA
UFO12337.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:13:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42388-RG | 5133 | CG42388-RG | 158..983 | 8..854 | 3245 | 94.9 | Plus |
| CG42388-RE | 3916 | CG42388-RE | 197..1022 | 8..854 | 3245 | 94.9 | Plus |
| CG42388-RH | 5956 | CG42388-RH | 981..1806 | 8..854 | 3245 | 94.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:12:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9049259..9050084 | 8..854 | 2455 | 93.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:12:59 has no hits.
UFO12337.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:18 Download gff for
UFO12337.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42388-RG | 150..982 | 1..853 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:48:24 Download gff for
UFO12337.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42388-RH | 973..1805 | 1..853 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:53:53 Download gff for
UFO12337.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42388-RH | 973..1805 | 1..853 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:53:53 Download gff for
UFO12337.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9049251..9050083 | 1..853 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:48:24 Download gff for
UFO12337.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8943284..8944116 | 1..853 | 94 | | Plus |
