UFO12344.5prime Sequence
602 bp (339 high quality bases) assembled on 2012-10-16
> UFO12344.5prime
AGTCGACATGATGAGCGATGTGGCGGGTGCGGCCGCTCCAGGTGGTACAC
CAGGTCAACCGCAGCAGGAGCAGGAACAGTCTTTGGCGGAGGCTGCTCCG
CGTACACCGACGCTTGCGAATCCTCCTCCATCCTCACAGGAGCTGGGTCG
GACCCCCAACCAGGAGAGCCGCCATAACGCAAATTCCCACTCCCGTCGAT
CGGGTGGTGGCCAGGTGCCATCGAAAGCCCAGGGTAACACCGAGTCCCAG
TTCTTCTTAGAGGATGGGGTTTTTCGCATTGATCGGCGGGGTCGCGTCCA
TTTTGGCTTGTAACCGCAACGACCGAGACCTATTCCTCCTCGAAGAGGAA
GATGTCGATCCGCTGTCAGGGGCGAGGTGCGTGTGCCTTCTATCCGGTGC
AAGGAGATGGTGATGACGGAACAGTCGATTGTCTGCGATCGCACCCTATG
CAGCGATGTGTGCGAGCGTCTGCAGAAAAACGTTTGCTGCAGCGGCTACG
TGCGGATGTCATGTACGCGCGATGTTATGTATGGCTCAGATGTCATAAAT
GTGCCGCGAGCGACTGCTCGATTCGATGACATTGTGCTTCCTGCATGACC
CT
UFO12344.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:13:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10254-RC | 4940 | CG10254-RC | 277..827 | 6..529 | 2070 | 94.7 | Plus |
CG10254-RA | 4997 | CG10254-RA | 277..827 | 6..529 | 2070 | 94.7 | Plus |
CG10254-RB | 4827 | CG10254-RB | 107..657 | 6..529 | 2070 | 94.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:13:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23694023..23694450 | 427..6 | 1830 | 97.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:13:12 has no hits.
UFO12344.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:22 Download gff for
UFO12344.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10254-RA | 201..660 | 1..451 | 96 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:48:34 Download gff for
UFO12344.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10254-RB | 103..562 | 1..451 | 96 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:54:04 Download gff for
UFO12344.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10254-RB | 103..562 | 1..451 | 96 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:54:04 Download gff for
UFO12344.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23694023..23694453 | 1..427 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:48:34 Download gff for
UFO12344.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19519745..19520175 | 1..427 | 97 | | Minus |