UFO12346.5prime Sequence
998 bp (862 high quality bases) assembled on 2012-10-16
> UFO12346.5prime
GTCGACATGACCGAGGCAGCTGGAGCAACCAACCCAGGAGGAGCCGCCGG
AGACGCGGAATCGTACGGCAAAGAAATGGCTCTGCAGTCCGGTAGGCCGA
AAGAGCCAACCAAGTTGGACGACCTGGTGCAATATGTGAGCCTCCATGTT
CGCATACCCACGCCGTTGACCGGTGTTGTGCTGCCCTTTGTGCCACTTTA
CCTGTCGGCATTCTACCTGTGGATCAACGTTACGGGTGGACAGGAGAATG
ATACCACCAATAACGATGTGATAACTGCCGATAACCAAACGACCACGGAT
AATATAACAACTTGGAATGACGTGGGATTCATCGGCGTACTAGCCATTGC
CTTTCTGCACATTCTGACGCTGCTCTTCTGCTACTGGAGCGTTCACGTGC
TGGCCTTCCTCACTTGCCGTCGTGTAAAGCTCCCCGGCGCCAATGTGCTG
GCCAAAGTCGTACCCACTCCCAACAATGGCAACTCGAAGATCGTCCCCAT
TCGGTCCTCCAAGCTGGAGGATGGCTCAACACAGTATTATTTCGTTTTCC
AAAAGACCAAATACGTTTGGAATGAGGATCGGAAGACATTCCGCGCCGTC
GAATTCCCGGTAAATGGACTACTGAGCACCTATTCCTCATCTAGAGGTTT
GGAAACTGAGGAGGACATTAAGCGGGCTACTCAAACCTACGGAAATAACG
AAATGGAAATGGTGGTTTCTGAGTTCCACGAACTTTTCATAGAACGCGCC
ACTGCGCCGTTCTTCGTGTTCCAGTGTTCTCCGTGGACTGTGTGCATGGT
CCGACTACTGATACTATTCCCTGTTCACGCTTTTCATGCTAATTGCCTTC
GAGTGCACTATTGTAAGCAGCAGCTGCGAACATTGTTCGAGAATCCGAAA
TGGCCACAGCCCTACCTGATATTACGCCTTCGTCAAACAGTGGCGTCACC
TGGATCGACAGCTGCTACCGGGATTTGTGTTCATAACGCGGTCCAACG
UFO12346.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:12:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6230-RA | 4327 | CG6230-RA | 149..1150 | 7..994 | 4395 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:12:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11119297..11120171 | 878..7 | 4085 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:12:53 has no hits.
UFO12346.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:16 Download gff for
UFO12346.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6230-RA | 140..1146 | 1..998 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:48:19 Download gff for
UFO12346.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6230-RA | 145..1151 | 1..998 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:53:50 Download gff for
UFO12346.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6230-RA | 145..1151 | 1..998 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:53:50 Download gff for
UFO12346.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11119163..11120173 | 1..998 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:48:19 Download gff for
UFO12346.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11119163..11120173 | 1..998 | 96 | | Minus |
