Clone UFO12347 Report

Search the DGRC for UFO12347

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:123
Well:47
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcriptresilin-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO12347.5prime Sequence

968 bp (836 high quality bases) assembled on 2012-10-16

> UFO12347.5prime
AGTCGACATGTTCAAGTTACTCGGCTTGACGCTGCTCATGGCAATGGTGG
TCCTTGGGCGACCGGAGCCACCAGTTAACTCGTATCTACCTCCGTCCGAT
AGCTATGGAGCACCGGGTCAGAGTGGTCCCGGCGGCAGGCCGTCGGATTC
CTATGGAGCTCCTGGTGGTGGAAACGGTGGACGGCCCTCAGACAGCTATG
GCGCTCCAGGCCAGGGTCAAGGACAGGGACAAGGACAAGGTGGATATGCA
GGCAAGCCCTCAGATACCTATGGAGCTCCTGGTGGTGGAAATGGCAACGG
AGGTCGTCCATCGAGCAGCTATGGCGCTCCTGGCGGTGGAAACGGTGGTC
GTCCTTCGGATACCTACGGTGCTCCTGGTGGCGGAAATGGTGGACGCCCA
TCGGACACTTATGGTGCTCCTGGTGGTGGTGGAAATGGCAACGGCGGACG
ACCTTCAAGCAGCTATGGAGCTCCTGGTCAAGGACAAGGCAACGGAAATG
GCGGTCGCTCATCGAGCAGCTATGGTGCTCCTGGCGGTGGAAACGGCGGT
CGTCCTTCGGATACCTACGGTGCTCCCGGTGGTGGAAACGGTGGTCGTCC
TTCGGATACTTACGGCGCTCCTGGTGGCGGCAATAATGGCGGTCGTCCCT
CAAGCAGCTACGGCGCTCCTGGTGGTGAAACGGTGGTCGTCCATCTGACA
CCTATGGCGCTCCTGGTGGCGGTAACGGAAACGGCAGCGGTTGTCGTTCT
TCAAGCAGCTAATGGAGCTCCTGGTCAGGCCATGTGATTTGGTGTCGTCA
TCGGACTCTATGGTGCTCCTGGTCAGAACCAAAAACCAATGATTCATATT
GGCGCCCTGGTATCGGCAATGGCAACGGCGGACGTTCTTTCCGAGTCAGC
TATTGGGAGCCTCCAGGGCTCAGGACTGGGTGCCCGAACCTCTCGGATCT
CTACCGAACCCCCCAGCT

UFO12347.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:12:57
Subject Length Description Subject Range Query Range Score Percent Strand
resilin-RB 2666 CG15920-RB 644..1578 8..942 4125 96.9 Plus
resilin-RA 2281 CG15920-RA 124..1058 8..942 4125 96.9 Plus
resilin-RB 2666 CG15920-RB 904..1114 463..673 485 82.5 Plus
resilin-RB 2666 CG15920-RB 1099..1309 268..478 485 82.5 Plus
resilin-RA 2281 CG15920-RA 384..594 463..673 485 82.5 Plus
resilin-RA 2281 CG15920-RA 579..789 268..478 485 82.5 Plus
resilin-RB 2666 CG15920-RB 1196..1464 263..534 410 77.7 Plus
resilin-RA 2281 CG15920-RA 676..944 263..534 410 77.7 Plus
resilin-RB 2666 CG15920-RB 1241..1359 263..384 315 84.4 Plus
resilin-RA 2281 CG15920-RA 721..839 263..384 315 84.4 Plus
resilin-RB 2666 CG15920-RB 899..1116 560..777 300 77.3 Plus
resilin-RA 2281 CG15920-RA 379..596 560..777 300 77.3 Plus
resilin-RB 2666 CG15920-RB 904..1320 319..728 295 72.9 Plus
resilin-RB 2666 CG15920-RB 955..1356 268..675 295 73 Plus
resilin-RA 2281 CG15920-RA 384..800 319..728 295 72.9 Plus
resilin-RA 2281 CG15920-RA 435..836 268..675 295 73 Plus
resilin-RB 2666 CG15920-RB 899..1020 605..722 290 83.6 Plus
resilin-RA 2281 CG15920-RA 379..500 605..722 290 83.6 Plus
resilin-RB 2666 CG15920-RB 1156..1314 268..429 285 79.4 Plus
resilin-RA 2281 CG15920-RA 636..794 268..429 285 79.4 Plus
resilin-RB 2666 CG15920-RB 904..1024 520..634 280 82.6 Plus
resilin-RA 2281 CG15920-RA 384..504 520..634 280 82.6 Plus
resilin-RB 2666 CG15920-RB 1274..1465 545..717 260 77.1 Plus
resilin-RA 2281 CG15920-RA 754..945 545..717 260 77.1 Plus
resilin-RB 2666 CG15920-RB 1060..1365 280..591 240 73.5 Plus
resilin-RA 2281 CG15920-RA 540..845 280..591 240 73.5 Plus
resilin-RB 2666 CG15920-RB 916..1227 424..728 215 73.1 Plus
resilin-RA 2281 CG15920-RA 396..707 424..728 215 73.1 Plus
resilin-RB 2666 CG15920-RB 1181..1266 638..722 210 83.7 Plus
resilin-RB 2666 CG15920-RB 1337..1551 266..474 210 75 Plus
resilin-RA 2281 CG15920-RA 661..746 638..722 210 83.7 Plus
resilin-RA 2281 CG15920-RA 817..1031 266..474 210 75 Plus
resilin-RB 2666 CG15920-RB 1481..1555 260..334 195 84 Plus
resilin-RA 2281 CG15920-RA 961..1035 260..334 195 84 Plus
resilin-RB 2666 CG15920-RB 1294..1350 151..207 180 87.7 Plus
resilin-RA 2281 CG15920-RA 774..830 151..207 180 87.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:12:54
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16780548..16781436 8..889 3855 97.6 Plus
2R 25286936 2R 16780842..16780966 503..627 430 89.6 Plus
2R 25286936 2R 16781043..16781167 302..426 430 89.6 Plus
2R 25286936 2R 16781198..16781326 364..489 325 85.3 Plus
2R 25286936 2R 16781145..16781263 263..384 290 84.4 Plus
2R 25286936 2R 16780832..16780928 538..634 275 85.6 Plus
2R 25286936 2R 16781078..16781174 292..388 275 85.6 Plus
2R 25286936 2R 16780803..16780924 605..722 240 83.6 Plus
2R 25286936 2R 16781175..16781269 497..591 235 83.2 Plus
2R 25286936 2R 16781178..16781263 545..630 235 84.9 Plus
2R 25286936 2R 16781034..16781224 539..728 225 76.8 Plus
2R 25286936 2R 16781079..16781260 494..675 225 77.3 Plus
2R 25286936 2R 16781385..16781459 260..334 195 84 Plus
2R 25286936 2R 16780904..16781020 658..777 185 82.6 Plus
2R 25286936 2R 16781037..16781131 635..728 185 82.1 Plus
2R 25286936 2R 16781085..16781170 638..722 185 83.7 Plus
Blast to na_te.dros performed on 2014-11-28 18:12:55 has no hits.

UFO12347.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:17 Download gff for UFO12347.5prime
Subject Subject Range Query Range Percent Splice Strand
resilin-RB 636..1545 1..906 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:48:22 Download gff for UFO12347.5prime
Subject Subject Range Query Range Percent Splice Strand
resilin-RA 116..1025 1..906 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:53:52 Download gff for UFO12347.5prime
Subject Subject Range Query Range Percent Splice Strand
resilin-RA 116..1025 1..906 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:53:52 Download gff for UFO12347.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 16780540..16781449 1..906 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:48:22 Download gff for UFO12347.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12668045..12668954 1..906 97   Plus