UFO12349.5prime Sequence
842 bp (362 high quality bases) assembled on 2012-10-16
> UFO12349.5prime
AGTCGACATGTTTTCCACCACCACACACTCCGTGCCCTACCTGTACCTAG
GCAACTTCAGCAGAAAGCCGCACTACTACTCCGTTAATCGAACCAAGCTG
CACGGGAGCGCGGGAGCTGCCCGGTTGTCCAAGTCCACGTCCACGTCCAG
CCGGAGTCATGACCTAGTGCTCGACCTGCGGAACCTGCTGAGCCGTTCGA
GCGCCAGTATACAGGGCATGGTGGAGAGGGCGGCTCGACTGAATGGCATT
CTCGACCGGCGGCTGGGTCGATGATGTGCTTGGCCCAAGGGTGACGAGCC
ATGCTGCCCCTCCCATGGCGGGATGTCCGAGTCACGTTGGGAGAGAGTCG
GCCAACACAGAATCGCGGTCGTGTCCCAGCTGTGCAAAAATTATTCAGGT
TCGAAGGTTTCCGCTAAACCGGTTGCAAGCAGGGTTTCCGTTGCCCAACA
GGCGGCCAAATGTCAAGGGTGGATTCTCAACTATTTACCACCAGGGTCTT
CTTTCGTCCCGTCTCTTTTTCAAAAACAAACAGGCTAAATCAAGAATACG
TTGGCTTTTAAGAACGGGATCGTTTCCATTTGGAGGGCGGGAACAAAAAG
CCGCAATCCCAACAATGACCCTCCCCGACTTAAAGAATGCTCTGGGCCAA
CCTCGCCCCCAGCTCTCTGGGATGGGGGACACACCCCCTTCAGGCTGAAA
AACTGAGACGGCTGCTGGCCAAATCCGAAGAGCATGGATTTAATAAAGCC
GAGAGCCTGAAAATTGCTTGTGCCGAGGGCTACTTGGCGCGTAATACTCG
GAGGACTCTCCAAATCAGGAAAACTTGAAATAACGAGACTTT
UFO12349.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:13:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3499-RC | 2515 | CG3499-RC | 107..867 | 8..832 | 2220 | 90.1 | Plus |
| CG3499-RD | 2940 | CG3499-RD | 306..1066 | 8..832 | 2220 | 90.1 | Plus |
| CG3499-RB | 2503 | CG3499-RB | 107..867 | 8..832 | 2220 | 90.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:13:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22885567..22885812 | 280..34 | 1185 | 99.6 | Minus |
| 2R | 25286936 | 2R | 22885053..22885119 | 751..685 | 335 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:13:21 has no hits.
UFO12349.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed on 2012-10-16 13:32:24 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 21:48:40 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 18:54:10 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:54:10 Download gff for
UFO12349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22885514..22885811 | 35..340 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:48:40 Download gff for
UFO12349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18773037..18773334 | 35..340 | 97 | <- | Minus |
