Clone UFO12351 Report

Search the DGRC for UFO12351

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:123
Well:51
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG34181-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO12351.5prime Sequence

681 bp (467 high quality bases) assembled on 2012-10-16

> UFO12351.5prime
AGTCGACATGGAAATCGTGGCAGTGGGTCTGGCGGCCTTTTTCCAACTGA
TGGGCTGCTACTTTTTTTTTGCTCAACCGCAGGATCGCTGTTCGCCGGCT
CCAAATTTGGCCAGCTGGTTATTTCTGGGTGCCACGTTGTGTTTCCTGTG
GGATATCAAAATATATCCTCGACGATTTATGCACATGTCCCGCTTCTGGC
GCATCCTGATCGAGATTGTGGCCTCCATTTTCCTGGCCGAGGTGGGCACC
GTCATAATTTGGTGTGCCTTGGAAAAGTTCCTGTTCAGCTTGACGAACGA
GCTCGTAAATTTGACGCAAATGTAGCTGTCGACCCCTCGCATTTTGTATA
TTGGCTTTCAGGACTAATTACCAGCTTGATAAGCGGAGCGATGCTGTGGT
ACGTCCTTGAAGCCACCGACGGCGGTGTACTACATAAAGAAGTTTTCCTG
CAATCTAAGAACTACAATTGTGTCGTTAACCTGGGCGGGATTTTCCGCTG
CTAATATCCAAAATGAATATGGGCGGCCCAAGCGCCGGGCATTAACCTAA
TATGCCCAATTAGCCCAAGAGGGGCGGTAACATTGCAAAATGAACAGCGT
GTGAAGTATTCTGAATCGGATGATGAATTGCAGTGACGCAAGCTTTTCTA
GACATTTCGTTTGGCCGCGCGGGCCCCAGGT

UFO12351.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:13:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG34181-RA 795 CG34181-RA 67..675 8..637 2565 96 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:13:25
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9367706..9368163 8..468 2155 99.3 Plus
Blast to na_te.dros performed on 2014-11-28 18:13:26 has no hits.

UFO12351.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:26 Download gff for UFO12351.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34181-RA 60..593 1..546 96 == Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:48:43 Download gff for UFO12351.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34181-RA 60..593 1..546 96 == Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:54:12 Download gff for UFO12351.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34181-RA 60..593 1..546 96 == Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:54:12 Download gff for UFO12351.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 9367699..9368232 1..546 96 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:48:43 Download gff for UFO12351.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9367699..9368232 1..546 96 == Plus