UFO12354.5prime Sequence
855 bp (713 high quality bases) assembled on 2012-10-16
> UFO12354.5prime
GTCGACATGTGGAAAATTCTGTGCGGGATCGTCGTTCTCGTGACGATTGT
GGTGAATCAGCTGTCTGAAGCAAGGGAAGTCCGCCGGCGAAGAGGCCTTA
TGCTCCAATTGGACAACTACCTTAGCTACGATGGAATAATGCAGTATCTG
GATGAGCTGGCTCTGTCCCACAGTAACCGGGTGACCCTAAAGGATGTGGC
TCGGACCTACGAGAACAGAGCCCTGAAAATGGCGATAATAACCAACGGAG
ATGGACGTCCCGGAAAGAGAGTGATATTCTTGGATGCTGCCCTCCATTCG
CGTGAGTGGATGACTCCCGCCGCCGCCCTGCTCACCATCCATAAACTGGT
GGTGGAGTTTGCGGAGAATTCCGACCTTTTGACTGATTACGATTGGCACA
TTATGCCACTGGCAAATCCAGATGGCTACGAGTATTCACGGAACACAGAG
CGATACTGGAGAAACACGAGGACACCGAATGGCGGCAACTGTTTTGGCAC
CAATCTCAACAGGAATTTTGCCGTTGACTGGAATGTGGGTTTTCCAGAAC
TAAAGGATCCCTGCGATGAGAACTACGCTGGTAGTTCACCATTCTCAGAG
GTGGAGGCACGTACAGTGCGCGACATATGCACGGCCTAGTGGAAAGCAAA
CGGGCTGTAATGTATCTCTCACTGCACACGGCAAACGATCGGTCTTCTAT
CCTTGGGTCTACGATACGATCAGTGTCAAACCAAAGGAGCATGACGAATC
GAAGATTTGTGCTGATAGAGTTGCAAGCACGGGCACTTATAAGACGTGCA
TATGCTAAATATGCGACATTGTGACAGCATGACCTACGCACTGCTTGCAG
GATTC
UFO12354.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:13:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8539-RB | 1538 | CG8539-RB | 197..1070 | 5..854 | 3775 | 96.9 | Plus |
| CG8539-RA | 1319 | CG8539-RA | 37..910 | 5..854 | 3775 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:13:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7497920..7498635 | 718..5 | 3480 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:13:28 has no hits.
UFO12354.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:26 Download gff for
UFO12354.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8539-RA | 33..910 | 1..855 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:48:45 Download gff for
UFO12354.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8539-RA | 33..910 | 1..855 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:54:14 Download gff for
UFO12354.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8539-RA | 33..910 | 1..855 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:54:14 Download gff for
UFO12354.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7497921..7498638 | 1..717 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:48:45 Download gff for
UFO12354.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7491021..7491738 | 1..717 | 99 | | Minus |
