UFO12361.5prime Sequence
482 bp (282 high quality bases) assembled on 2012-10-16
> UFO12361.5prime
AGTCGACATGAAATACTTGTATCTTCTTTTGTTGGCCACCTCAGTAGAGA
GCGGGTTTTGGGAGGACTTTTATCGAATTCTAGCATCGCAGAATGCAAAA
AGGAACCTCATTTATTCGCCGATATCTGCTGAGATTATTATGAGCATGGT
TTATATGGCATCAGGTGGAAAAACGTTCGAAGAGCTTAGAAACGTTTTGA
AATTTTCTGAGAAAAAAAACCCTTGTGGCAAAACAACTATCGTAGCCTTT
TTAAGCGATCTTAAAGCCCCCCCGAAACGGTTTATTAATCCTGCAATATG
GGCAAAACCGGGAATATTTTGTGAACCAAGAAAAAATTGCCTTTGTTACC
CGGGATTTTAACAGGTTGGGCACGAAAGGGCTTTCAAGGGCCAAAAGCCC
AAGTCGATCCGGTCCAAGACGAATCCCAGTTCAGGTGCGGCCGCGCGATA
GTCCAATAGCTGGGATAATTAAATTCGAAACG
UFO12361.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:13:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Spn28B-RB | 1186 | CG6717-RB | 12..443 | 8..474 | 1295 | 89.7 | Plus |
Spn28B-RA | 1248 | CG6717-RA | 12..443 | 8..474 | 1295 | 89.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:13:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7582005..7582245 | 21..264 | 1040 | 98 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:13:39 has no hits.
UFO12361.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:30 Download gff for
UFO12361.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Spn7-RA | 1..277 | 6..287 | 95 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:48:52 Download gff for
UFO12361.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Spn28B-RA | 5..285 | 1..287 | 95 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:54:20 Download gff for
UFO12361.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Spn28B-RA | 5..285 | 1..287 | 95 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:54:20 Download gff for
UFO12361.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7582000..7582265 | 16..287 | 95 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:48:52 Download gff for
UFO12361.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7582000..7582265 | 16..287 | 95 | == | Plus |