UFO12363.5prime Sequence
848 bp (716 high quality bases) assembled on 2012-10-16
> UFO12363.5prime
AGTCGACATGATATGCCGCCTGTGCCTGGACGATGCTGAGCACAGTGTGC
CAATCTTTGACCAGGATGACTCCGGCGATCAGCCAGTGCCCTCCAATCTA
GCGGAGCTAATTGAGAAACACCTGCAGTTGGTGCTCCTGCCCAACGATGG
GGTGTCCAAGAGCCTCTGCACCCAGTGCTGGCAGCAGTTGGCCGACTTCG
AGCAGTTCTGCGCCATGGTGATGAAGAAACAATTGGGCCTGCAGCAACTG
AAGATGGAGCCGTTCTCCGAGGACGAGGATGCGGACACTAAGGCGCAGAT
CCTGTGCGAACCGGAGATCGATGTGAGTCCCGCGGCCGCCGACAACGAAG
AGTGCAACGAGATCGACGGCGATGCCAGCAGCAACAGCAGAAGCAGTAGC
ATTCGCACCACATCGCTACGAGAAATGCGCCTGCCGTCGCCCATTAGACG
CCGTATGCGTCTACCCCGGGCAGTCACAGCACCCAAAACTCATGCTGTCA
AGGCCAAGGCCAGGACGAAGACCCACAAGGCCGAGGCGGACGAGGATGAG
ATGCCGAAGCGAGGGCGATCCAGAGAGCCGCAGCAGCAATAGCCGCGAAA
TGACAGCTATATCGCTCTGCACGGTCGTTTGGAGTGCTGCATTTGCGCGG
CGACGAACAGTTTCCCAATTTCGCCGAGATGAAGCGGCACTTCCGGAATC
ATCACCAGTCCCTCGGTTATGTGTCTGCTGCAGCGGGCGCTACAGAAGCT
GCCTCTACGTGACCACCTGCACATGCCACAACGATCCGATACTTTAGTAC
TGACAGCCAGGCATGCAGCTTTCTAGACATCGTTTGCGCGCCGGCAGT
UFO12363.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:13:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11695-RB | 1800 | CG11695-RB | 71..870 | 8..797 | 3655 | 98.1 | Plus |
| CG11695-RA | 1742 | CG11695-RA | 71..870 | 8..797 | 3655 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:13:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11577144..11577738 | 133..723 | 2760 | 99.2 | Plus |
| X | 23542271 | X | 11576953..11577078 | 8..133 | 630 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 18:13:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1512..1564 | 349..401 | 112 | 67.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2273..2383 | 291..401 | 112 | 61.4 | Plus |
UFO12363.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:31 Download gff for
UFO12363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11695-RB | 65..884 | 1..808 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:48:55 Download gff for
UFO12363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11695-RA | 65..870 | 1..797 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:54:23 Download gff for
UFO12363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11695-RA | 65..870 | 1..797 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:54:23 Download gff for
UFO12363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11576947..11577078 | 1..133 | 97 | -> | Plus |
| X | 11577145..11577832 | 134..808 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:48:55 Download gff for
UFO12363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11470980..11471111 | 1..133 | 97 | -> | Plus |
| arm_X | 11471178..11471865 | 134..808 | 97 | | Plus |
