UFO12366.5prime Sequence
874 bp (432 high quality bases) assembled on 2012-10-16
> UFO12366.5prime
GTCGACATGTCTATGAAAGCCATCATCATCGGATGCCTGGCCGTGCTGGT
GACACTGGGTGCGGCCCTCGATGAACATCCTCATTTCTGCATTAAGACAG
ATCCCCTCCTTCTGTCGGAGATCGATCGACATGTGGTCATCCCCAGCGAG
GAGGACCTACAGTGCCATATTAAGGCCACCACGTTGACCCAAAACGAGAA
GGCAAACCTCGTGGACACCCCTGTGCGCAGATCATGGCTCCACCACAATC
AGGGGAGATAACCATCACTTTTTTTAGGGCTGCGCAACGGAGAACTGACT
GGGAAGGGGAGTTTCAGACGGGAGGGTGTGGCGCCAAACGGGAGGGTGAT
TTCGGGTCCTGGGCCCTGGAATCCCCTACCACAACCGGTGCCTCAAGAAA
CTATTGCGGGCCGGAGCTGAAATCCCCAAGGGAGGCGGACTGACCATAAC
ATTGGCCAAGGGCCCACGAAACGGTGGAGAGCGGGGAAAAAAAACAAGAA
GCTTTTGTTCACTTCCCGACCACACCCGGGAATCTTTGTCAATGGCGGGT
TGTCCCGACCAATTCTTGTTTCAACCTTGTGGTGGTCATGAATTTTTGGC
CGATAAACTTTTATGGGTCTTGAAGGATAACATTTAACGTACTGGGTGGG
AACTGGGAACCTTTGGGCATACCAGCTGAGGAACATTACTTACCTGCCCG
TGGCGCAATGTGACTAACAGCTACAAGATGCACCTGGGTGACAGTGTGCT
CCGAATCCCAGTGGCGAACGTAAGCCCAATTACGGTAGCTACCTACTACG
ATTGTTTGTGGAAGAAGGATCCTTGTGAACATGTCCCAGTGTGTACCAGC
ATAGGAAGCTATCCAAGGCTGCCT
UFO12366.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:13:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15674-RB | 1620 | CG15674-RB | 85..873 | 7..874 | 2260 | 89.6 | Plus |
| CG15674-RA | 1809 | CG15674-RA | 274..1062 | 7..874 | 2260 | 89.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:13:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21632280..21632479 | 7..206 | 985 | 99.5 | Plus |
| 2R | 25286936 | 2R | 21633414..21633607 | 666..865 | 575 | 91.5 | Plus |
| 2R | 25286936 | 2R | 21632963..21633072 | 200..313 | 375 | 94.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:13:50 has no hits.
UFO12366.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed on 2012-10-16 13:32:33 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 21:48:59 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 18:54:28 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:54:28 Download gff for
UFO12366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21632274..21632474 | 1..201 | 98 | -> | Plus |
| 2R | 21632965..21633072 | 202..313 | 95 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:48:59 Download gff for
UFO12366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17519779..17519979 | 1..201 | 98 | -> | Plus |
| arm_2R | 17520470..17520577 | 202..313 | 95 | == | Plus |
