UFO12367.5prime Sequence
222 bp (156 high quality bases) assembled on 2012-10-16
> UFO12367.5prime
AGTCGACATGAACTACAATCCAAATCCGGGTATGCGGAACCGTAAGTGGG
AGAACTCCTCAGCTGCCGGTCGCCCAAGGCCGCCGAAGCGTGTGAGTGAT
GTTAACGCCATGGGACCCTCGGCTCCGATGATGGGCGGTGGCGCCATCTT
CATGGCCCCGCCCACCGGCCCAGGAATACTATTGCTTTTATGTACTGACA
TCTGCTTTGGTCTGATCAACAT
UFO12367.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:13:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5484-RC | 1522 | CG5484-RC | 108..281 | 8..181 | 840 | 98.9 | Plus |
CG5484-RA | 1507 | CG5484-RA | 137..266 | 52..181 | 605 | 97.7 | Plus |
CG5484-RB | 1495 | CG5484-RB | 130..254 | 57..181 | 595 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:13:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 26718328..26718452 | 57..181 | 595 | 98.4 | Plus |
3R | 32079331 | 3R | 26717978..26718026 | 8..56 | 245 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:13:52 has no hits.
UFO12367.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:34 Download gff for
UFO12367.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5484-RC | 125..304 | 1..181 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:49:00 Download gff for
UFO12367.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5484-RC | 102..281 | 1..181 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:54:29 Download gff for
UFO12367.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5484-RC | 102..281 | 1..181 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:54:29 Download gff for
UFO12367.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26718328..26718477 | 57..205 | 92 | <- | Plus |
3R | 26717972..26718026 | 1..56 | 92 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:49:00 Download gff for
UFO12367.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 22543694..22543748 | 1..56 | 92 | -> | Plus |
arm_3R | 22544050..22544199 | 57..205 | 92 | <- | Plus |