UFO12369.5prime Sequence
462 bp (288 high quality bases) assembled on 2012-10-16
> UFO12369.5prime
AGTCGACATGAGCAGCAAGGTGAACTTCGTCTTCGACAGCAATCCTTTGG
GGCTCTATCAAGCCGGTCAGCTTATCTCCGGCACGGCGGAACTGATTACG
GAGCGCCCCAAGACGATTCGATCGATCTTTATAACCATAAATGGATACGG
CGAGACGCGTTGGCAGGAAAGCGAGGAGCGAGTGGGAGAGGATGGGAAGA
CGACCAAGTCCCTGGGTGACCCCACACCACCCCCCGAAGGTCTACTACAG
CACTGACCAGCCGGGTTTACGGGCCAAGGCCCGGGTTGGCCTCGGCAGCT
GGGAGTTTGCCCAACCGGCCAAGTACACGTTCTTTTCCCTTCCGGGGCCT
ACCATTTCCGCCCAATGGGAACCCCCCCTCATTCCAAGTGGGTGCTCATG
GGTCCGATTTAAGCAACGAGGGTTACCCCTATACCATTCCGATTGCGGGC
GGTTCTGCCTAC
UFO12369.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:13:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14696-RA | 1642 | CG14696-RA | 168..555 | 8..428 | 1260 | 91.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:13:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10884720..10884834 | 122..8 | 575 | 100 | Minus |
3R | 32079331 | 3R | 10883777..10883914 | 264..123 | 515 | 95.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:13:58 has no hits.
UFO12369.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:35 Download gff for
UFO12369.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14696-RA | 165..518 | 1..384 | 91 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:49:04 Download gff for
UFO12369.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14696-RA | 165..518 | 1..384 | 91 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:54:32 Download gff for
UFO12369.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14696-RA | 165..518 | 1..384 | 91 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:54:32 Download gff for
UFO12369.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10884720..10884837 | 1..122 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:49:04 Download gff for
UFO12369.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6710442..6710559 | 1..122 | 96 | | Minus |