Clone UFO12369 Report

Search the DGRC for UFO12369

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:123
Well:69
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG14696-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO12369.5prime Sequence

462 bp (288 high quality bases) assembled on 2012-10-16

> UFO12369.5prime
AGTCGACATGAGCAGCAAGGTGAACTTCGTCTTCGACAGCAATCCTTTGG
GGCTCTATCAAGCCGGTCAGCTTATCTCCGGCACGGCGGAACTGATTACG
GAGCGCCCCAAGACGATTCGATCGATCTTTATAACCATAAATGGATACGG
CGAGACGCGTTGGCAGGAAAGCGAGGAGCGAGTGGGAGAGGATGGGAAGA
CGACCAAGTCCCTGGGTGACCCCACACCACCCCCCGAAGGTCTACTACAG
CACTGACCAGCCGGGTTTACGGGCCAAGGCCCGGGTTGGCCTCGGCAGCT
GGGAGTTTGCCCAACCGGCCAAGTACACGTTCTTTTCCCTTCCGGGGCCT
ACCATTTCCGCCCAATGGGAACCCCCCCTCATTCCAAGTGGGTGCTCATG
GGTCCGATTTAAGCAACGAGGGTTACCCCTATACCATTCCGATTGCGGGC
GGTTCTGCCTAC

UFO12369.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:13:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG14696-RA 1642 CG14696-RA 168..555 8..428 1260 91.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:13:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10884720..10884834 122..8 575 100 Minus
3R 32079331 3R 10883777..10883914 264..123 515 95.8 Minus
Blast to na_te.dros performed on 2014-11-28 18:13:58 has no hits.

UFO12369.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:35 Download gff for UFO12369.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14696-RA 165..518 1..384 91   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:49:04 Download gff for UFO12369.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14696-RA 165..518 1..384 91   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:54:32 Download gff for UFO12369.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14696-RA 165..518 1..384 91   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:54:32 Download gff for UFO12369.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 10884720..10884837 1..122 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:49:04 Download gff for UFO12369.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6710442..6710559 1..122 96   Minus