UFO12370.5prime Sequence
335 bp (224 high quality bases) assembled on 2012-10-16
> UFO12370.5prime
GTCGACATGGCAACTGCAACCAGCGGCAGTGGACTCCATCTGGAGGCCAT
CGATCGCATCGGCTCCATTCCCCTTGTGGAATCCAGTGTGAAGCGGGTGG
AGACCATCTACGATAAGGTGAAGAACAACAATAGGCTATTCTCATGGTAT
TTTGAGACGGCGGAGGCCCCCATTTCGGCCGCCTACGAAACCATCCAGCC
GGGGGTCAAGCTTTTCGAGCCATCCATTCAGCCGCCTGACAACGTGAATG
TGCAAAAGCCTGAACTTTCTGGAGACAACCGCATACCACTGGTCCATACC
TGCCCGCCCGAAAGGTAGGATCTGGAACACCAAGG
UFO12370.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:13:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Lsd-1-RD | 1432 | CG10374-RD | 76..397 | 7..335 | 1270 | 93.9 | Plus |
| Lsd-1-RC | 1813 | CG10374-RC | 457..778 | 7..335 | 1270 | 93.9 | Plus |
| Lsd-1-RA | 1510 | CG10374-RA | 76..397 | 7..335 | 1270 | 93.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:13:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23764385..23764666 | 10..294 | 1145 | 95.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:13:36 has no hits.
UFO12370.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:29 Download gff for
UFO12370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lsd-1-RA | 452..778 | 1..335 | 92 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:48:50 Download gff for
UFO12370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lsd-1-RA | 71..397 | 1..335 | 92 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:54:18 Download gff for
UFO12370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lsd-1-RA | 71..397 | 1..335 | 92 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:54:18 Download gff for
UFO12370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23764383..23764691 | 6..320 | 93 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:48:50 Download gff for
UFO12370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19590105..19590413 | 6..320 | 93 | -> | Plus |
