Clone UFO12376 Report

Search the DGRC for UFO12376

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:123
Well:76
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptWnt2-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO12376.5prime Sequence

286 bp (234 high quality bases) assembled on 2012-10-16

> UFO12376.5prime
GTCGACATGTGGAAAATACATAACAAGCTCTTAATCTACATACTCTGGAT
TATGGAAATAAGATTAGTGTCCAGCTTTACATCCGTCATGCTCTGTGGCC
GGATTCCGGGCCTGACCCCGGGCCAGCGAAATATGTGCCGCGAGATGCCC
GACGCACTGATTGCCCTGGGCGAGGGCCACCAATTGGGCGCCCAGGAGTG
CAGCACCAGTTCCGAGGACACCGCTGGACTGCTCGGAGTGTGCACGCACG
CTCGCCATGTATACACAGTCCGGGCGCAACTTGCAT

UFO12376.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:14:15
Subject Length Description Subject Range Query Range Score Percent Strand
Wnt2-RA 2240 CG1916-RA 1028..1266 2..238 1130 98.7 Plus
Wnt2-RB 2235 CG1916-RB 1028..1261 2..238 1045 96.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:14:13
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9501369..9501548 61..238 800 98.9 Plus
2R 25286936 2R 9495193..9495253 2..62 290 98.4 Plus
Blast to na_te.dros performed on 2014-11-28 18:14:14 has no hits.

UFO12376.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:40 Download gff for UFO12376.5prime
Subject Subject Range Query Range Percent Splice Strand
Wnt2-RA 1024..1276 1..248 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:49:18 Download gff for UFO12376.5prime
Subject Subject Range Query Range Percent Splice Strand
Wnt2-RA 1027..1279 1..248 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:54:44 Download gff for UFO12376.5prime
Subject Subject Range Query Range Percent Splice Strand
Wnt2-RA 1027..1279 1..248 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:54:44 Download gff for UFO12376.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 9501371..9501561 63..248 97   Plus
2R 9495192..9495253 1..62 96 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:49:18 Download gff for UFO12376.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5388876..5389066 63..248 97   Plus
arm_2R 5382697..5382758 1..62 96 -> Plus