UFO12383.5prime Sequence
480 bp (304 high quality bases) assembled on 2012-10-16
> UFO12383.5prime
AGTCGACATGAAGCCATTCTTTATTGCCGCAGCGTTGCTGATCTCGACGG
TGTCCGCCTCTTGGCACGGAGCCGTCTCCACACAGTACCAGCACCTGGAC
CCGCACAGCCACACCTACTCCTACGGATACGCCGATCCCAACTCACAGAA
GCACGAGACGCGAAGCCATGACGGCACCACGCACGGCTCCTACTCCTACG
TGGATGGTCACGGTCATGTGCAGTCGGTGTCCTACACCGCTGATCCGCAC
CATGGCTTTCACGGCCGTGGGGCACCAACCTGCCCTCAGCTCCTCAAGTT
CTTGCGCTTCCCGTTTACGCTGGCCCCCACGCCCATGGGGCTAATGCTCC
TTAGCCACGGACCATCCCATTCCGGGGGTGAACCAGGGAGGGGTCCCCGT
CAACTCCCCAAGTGAACCCGCCAGGGCCCCCCAGGCGGTGCCACGCTGTG
GCCCCCAAATGGCGGAGGAACCCCCTGAAA
UFO12383.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:14:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cpr92F-RA | 1858 | CG5494-RA | 161..640 | 8..477 | 1595 | 91.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:14:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 20671136..20671467 | 20..353 | 1345 | 94.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:14:00 has no hits.
UFO12383.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:36 Download gff for
UFO12383.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr92F-RA | 154..516 | 1..363 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:49:07 Download gff for
UFO12383.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr92F-RA | 154..516 | 1..363 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:54:34 Download gff for
UFO12383.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr92F-RA | 154..516 | 1..363 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:54:34 Download gff for
UFO12383.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 20671136..20671479 | 20..363 | 95 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:49:07 Download gff for
UFO12383.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 16496858..16497201 | 20..363 | 95 | == | Plus |