Clone UFO12383 Report

Search the DGRC for UFO12383

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:123
Well:83
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCpr92F-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO12383.5prime Sequence

480 bp (304 high quality bases) assembled on 2012-10-16

> UFO12383.5prime
AGTCGACATGAAGCCATTCTTTATTGCCGCAGCGTTGCTGATCTCGACGG
TGTCCGCCTCTTGGCACGGAGCCGTCTCCACACAGTACCAGCACCTGGAC
CCGCACAGCCACACCTACTCCTACGGATACGCCGATCCCAACTCACAGAA
GCACGAGACGCGAAGCCATGACGGCACCACGCACGGCTCCTACTCCTACG
TGGATGGTCACGGTCATGTGCAGTCGGTGTCCTACACCGCTGATCCGCAC
CATGGCTTTCACGGCCGTGGGGCACCAACCTGCCCTCAGCTCCTCAAGTT
CTTGCGCTTCCCGTTTACGCTGGCCCCCACGCCCATGGGGCTAATGCTCC
TTAGCCACGGACCATCCCATTCCGGGGGTGAACCAGGGAGGGGTCCCCGT
CAACTCCCCAAGTGAACCCGCCAGGGCCCCCCAGGCGGTGCCACGCTGTG
GCCCCCAAATGGCGGAGGAACCCCCTGAAA

UFO12383.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:14:01
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr92F-RA 1858 CG5494-RA 161..640 8..477 1595 91.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:14:00
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 20671136..20671467 20..353 1345 94.9 Plus
Blast to na_te.dros performed on 2014-11-28 18:14:00 has no hits.

UFO12383.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:36 Download gff for UFO12383.5prime
Subject Subject Range Query Range Percent Splice Strand
Cpr92F-RA 154..516 1..363 94   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:49:07 Download gff for UFO12383.5prime
Subject Subject Range Query Range Percent Splice Strand
Cpr92F-RA 154..516 1..363 94   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:54:34 Download gff for UFO12383.5prime
Subject Subject Range Query Range Percent Splice Strand
Cpr92F-RA 154..516 1..363 94   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:54:34 Download gff for UFO12383.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 20671136..20671479 20..363 95 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:49:07 Download gff for UFO12383.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16496858..16497201 20..363 95 == Plus