UFO12392.5prime Sequence
978 bp (868 high quality bases) assembled on 2012-10-16
> UFO12392.5prime
AGTCGACATGACGAACACCGATGTGCGAAAGAGAAAACTGGCCACGGATG
AGAAGCCACCGCGGCGGAAAAGTAGCGGATCACCAAATGCCAGCAGTGGT
GGAAACCGCGGGCCCAGCGGCCTCAAGATCTCCTTCCTGTGCCTGATCAT
CTCCGTCATCCTCCTGCTCTTTGTCTTTGGCTTCGTCTCCGAGAACGCCA
GTCCGTATCTGGCCCGTTTGGCCTCCAAGTTTGGCTACAGCAAGGTGCAG
TATGCGGCCATCATCGATGCCGGATCGACGGGCAGCCGTGTGCTGGCCTA
CAAGTTCAATCGCAGCTTCATCGACAACAAACTGGTGCTGTACGAGGAGC
TGTTCAAGGAGCGCAAGCCGGGTCTGAGCTCCTTCGCGGATAATCCCGCC
GAGGGTGCCCACTCCATCAAACTGCTGCTGGACGAGGCCCGCGCCTTCAT
ACCCAAGGAGCACTGGTCTTCCACACCGCTGGTTCTGAAAGCGACCGCCG
GCCTGAGACTCCTGCCCGCCAGCAAGGCGGAAAACATTCTAAATGCCGTC
CGAGATCTCTTCGCCAAGTCCGAGTTTAGTGTGGATATGGATGCCGTGAG
ATCATGGACGGCACGGACGAGGGCATCTTCAGCTGGTTTACCGTGAACTT
CCTGCTGGGCCGCCTGTCCAAGACGACCAGGCAGCTGCCTTGACTTGGCG
GCGGTAGCACGCAGTAACCTTCTCGCCAACGGATCCGGACCAGTGCCCGT
GTACGATAAGTACATGCACGAGGTGTCACGTCCAGCAAGAAGATCACGTC
TTCACGCACAGCTATCTGGGACTGGGTCTATGGCTGCACGCCATGCTGTC
TTCACGCACGGCTACAAGAAGAAGAATACGGTGCTGGAGAGGCGTCTGCG
TGAATCCATATCGCCATCGCACGTGAATACCGGCAATGGTGCGTACAGTC
AGCGCAAGGAGAATGCAGTCCATGCGAG
UFO12392.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:14:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NTPase-RE | 2111 | CG3059-RE | 193..1165 | 8..965 | 4335 | 97.6 | Plus |
| NTPase-RA | 2095 | CG3059-RA | 208..1150 | 38..965 | 4185 | 97.6 | Plus |
| NTPase-RC | 2182 | CG3059-RC | 294..1236 | 38..965 | 4185 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:14:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2881776..2882512 | 907..179 | 3160 | 98.4 | Minus |
| 2L | 23513712 | 2L | 2882691..2882833 | 180..38 | 715 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:14:55 has no hits.
UFO12392.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:51 Download gff for
UFO12392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NTPase-RB | 179..1176 | 1..978 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:49:46 Download gff for
UFO12392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NTPase-RE | 185..1182 | 1..978 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:55:08 Download gff for
UFO12392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NTPase-RE | 185..1182 | 1..978 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:55:08 Download gff for
UFO12392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2881714..2882511 | 180..961 | 97 | <- | Minus |
| 2L | 2882692..2882833 | 38..179 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:49:46 Download gff for
UFO12392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2882692..2882833 | 38..179 | 100 | <- | Minus |
| arm_2L | 2881714..2882511 | 180..961 | 97 | <- | Minus |
