UFO12393.5prime Sequence
997 bp (868 high quality bases) assembled on 2012-10-16
> UFO12393.5prime
AGTCGAAATGCGCGACGCACCAGAAGATCAGTCCGTAACGGTTTCCATGC
CGGCATCTGCATCCGGCTCTGCCGCCGGCTCCACGGGACCGTCATCGGAT
CGCCGGATGACGCAGCGCCTGCTCGTGGAGCTCCTGGTGGTGGTGGTGCT
CGTCATTCCCATCTGCGTGTACGAGTTCGCGGTGGATCCCGTGCGACGCG
GCTTTTTCTGCGACGACGAGAGCATCAGCTATCCATTCCAGGACAACACC
ATAACGCCGGTAATGCTCGGCCTGATCGTGGGCCTGCTTCCGGCCCTGGT
CATGGTGGTGGTGGAGTACGTTAGCCACCTGCGCGCCGGAGACATCTCGG
CCACGGTGGATCTGCTTGGCTGGAGGGTATCCACATGGTACGTGGAGCTG
GGCCGGCAGTCCACCTACTTCTGCTTTGGCCTGCTGCTCACCTTTGACGC
TACCGAGGTGGGCAAGTACACCATCGGACGCCTGAGACCGCACTTCCTGG
CCGTTTGCCAGCCGCAGATTGCGGATGGGAGCATGTGCTCCGATCCGGTC
AACCTGCACCGCTACATGGAGAACTACGACTGCGCCGGCGAGGGCTTCAC
CGTGGAGGACGTGCGACAGGCCCGCCTCAGCTTTCCCAGCGGTCACTCTA
GTTTGGCCTTCTATGCCATGATCTACGTGGCACTCTACCTCCAGCGGAAG
ATCACCTGGCGGGGATCGAAGCTGAGCCGGCACTTTGTGCAGTTCGCAGT
GTGATGGTAGCCTGTATACGGCCCTCAGCCGTGTAATGACCATTGCACCC
ACTGGTCCGACGTCCTTTCCGGATCGCTACTTGGCGTGCTGGCGCTCTAA
TCACCGCCCACTATATAGCAGATTGTTCGACGACGGGCAAGCATTTTTCT
AGCGGTGGCCTGAGGAGGAAACACAGGCGCCCTCTGCAAGAAGAGTCTGC
CCCACCACTCCCCGCGTACTCCGTGAACACAGCTTCAGCGAGGAATC
UFO12393.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:14:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11426-RA | 1882 | CG11426-RA | 588..1591 | 5..994 | 4530 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:14:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22472215..22473218 | 5..994 | 4225 | 97.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:14:58 has no hits.
UFO12393.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 13:32:51 Download gff for
UFO12393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11426-RA | 583..1591 | 1..997 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:49:49 Download gff for
UFO12393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11426-RA | 585..1593 | 1..997 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:55:11 Download gff for
UFO12393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11426-RA | 585..1593 | 1..997 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:55:11 Download gff for
UFO12393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22472212..22473220 | 1..997 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:49:49 Download gff for
UFO12393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22465312..22466320 | 1..997 | 97 | | Plus |
