UFO12402.5prime Sequence
1105 bp (964 high quality bases) assembled on 2012-10-19
> UFO12402.5prime
AGTCGACATGGGTAGTATTAATAGTGAAGAGCAAAATGTCGCTGTATCCG
GATGGACAAAATCCAATTCACCGGAATTAATTGAAGAGGAGCGACTTTAC
ACCGAACTTGACTCGGAAGGTCGGATGATAAGCAGGACTATGACGCCATA
TGAGTGTCAGCTCGAAGGCGAAGTGGAGCAGTTGCAAGAGGCGCTTTTCA
AAATCTCGTCCCATTATGCCAAAGTTCAGTTCGGACTGCGACAAATATCC
TTGGCTTCAGGTTCCGAGAGGGAAAATCTGTTAAAAGATTTGGAGCGATT
AATAGCAAAAGGACTAGATGCGACTGGTCCCATACGGGGCGAAAAATTCT
CCATGCCAGCCAAACTTCGCGTGAAGCAAGACAAGATTCTTTGCCAACTG
CGTGGAAGTCTCGGAGACTTGGTCGGTGCAACTGGAGTTGGCTTTCACGC
AAATCATTACCCGGCCACAAACAGATCTCTTAAGATTTATACAGGTGCTT
CCAATAAGACTCCCCGCAGCAAAGGCGTCGGCCAGGATTGTGGTATAAGC
CGAAGATGCATTGGTCATGCAAAGGAAGAAAGCAAACCTGCCACTGGATA
CATGAAACGCACCTGTGGTGATTTAAGTACGGAAAGCAAGATACACCTTT
ACCATACCAAGTCAGCCACTTATTCGAAGATTCGCGGTAATAGTAAAACA
ACGGAAGATGGAAAAACTCGTACAAACAATAATTATTTGGAGCTGTTAAA
GTCGAATTTAATTGCAAGCTTTCTAGACCATTTCGTTTGGCGCGCGGGCC
CAGGTTAAGTGGTTCATAATCATAATCATATCATAATCATAATCACAACT
AGCCTAGGAGATCCTGGTCATGACTAGTGGCTTGGTATTCTCACCAATAA
AAAAACGCCCGGCGGCAACCGAGCGTTCTGAACCAATTCAGATGGTGTTC
TGAGGTCATTACTGGATTCAATCAACAGAAGTCCAAGCGAGCTCGATATC
AATTACGCCCCGCCTGCCAACTCATCGCAGGTACTGTTTGTAAATTCATT
AAGCATTTCTGCCGAACTGGTATCCATCCAAAACGGGTATGATAGAACCT
GTATC
UFO12402.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:16:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32461-RA | 882 | CG32461-RA | 17..773 | 7..763 | 3770 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:16:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22954530..22955286 | 763..7 | 3770 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:16:34 has no hits.
UFO12402.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-19 11:25:30 Download gff for
UFO12402.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32461-RA | 11..776 | 1..767 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:50:58 Download gff for
UFO12402.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32461-RA | 11..776 | 1..767 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:56:05 Download gff for
UFO12402.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32461-RA | 11..776 | 1..767 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:56:05 Download gff for
UFO12402.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22954526..22955288 | 1..767 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:50:58 Download gff for
UFO12402.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22947626..22948388 | 1..767 | 99 | | Minus |
