UFO12415.5prime Sequence
1100 bp (987 high quality bases) assembled on 2012-10-19
> UFO12415.5prime
AGTCGACATGTTGATTGGATCCTGTTGGGTGTTGATCTTATTTGCACGAA
GCTCCAATGGCATCTATAATGGAGTAGAGGCAAAGTTTGACTTCTGGACC
TTTCTTGCCTCCGTGTGGGTAAGTGGATATCATGAGTGCGGCGGTGCTGT
GATCGACAGCCGAATTGTCCTAACAGCCGCCCAGTGCGTCAAGAATAAGC
CGGTGAAGAGAATCACAGTCCGTGTGGGAACGCCGGATATCTATAGAGGT
GGTAGAATTATCAGGGTAACAGCGCTGGTGGTTCATGAAAATTATAAGAA
TTGGGACAACGATATCGCCCTCTTATGGCTAGAGAAGCCAGTGCTTTCCG
TACGAGTGACCAAAATTCCACTGGCCACCAAAGAACCCTCTGAAAACGAA
TATCCCAGCAATGCGGGATGGGGCGAAAAACTACTCGAGTCCTACGTCGT
GACTAGAAAACTGCAAAATGGCGTTACCAAAATCCGTCCCCGGAGCATGT
GCGCTGAAGAACTTGTTGAACCGGTTGGCGAGGAACTTCTTTGCGCCTTT
TACACCGAAAATGATATTTGTCCTGGCGATTATGGAGGTCCCTTGGTCCT
GGCCAACAAAGTGGTTGGCATCGCAGTGCAAGGACACGGCTGCGGGTTTG
CCGTTCTGCCATCACTTTACACGAACGTCTTCCACTACCTGGAATGGATA
GAAGAGAATGCAGAGAAACTAATCAAAAATAAAGCAAGCTTTCTAGACCA
TTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATC
ATAATCATAATCACAACTAGCCCTAGGAGATCCTGGTCATGACTAGTGCT
TGGATTCTCACCAATTAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAAC
AAATCCAGATGGAGTTCTGAGGTCATTTACTGGATTTTATCACAGAGTCC
AGCGGAGCTCGATAATCCAATTACGCCCCGCCCTGCCCACTCATCGCAGT
ACTTGTTTGTATTCATTTAGCATTTCTGCCGACCATGAAAGCCCATCACA
AACCGCAATTGAATGTAACTGAATTCGCCACGGATCAGCACCCTGTTCGC
UFO12415.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:17:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4271-RA | 764 | CG4271-RA | 12..737 | 8..733 | 3630 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:17:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2285174..2285899 | 8..733 | 3630 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:17:09 has no hits.
UFO12415.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-19 11:25:38 Download gff for
UFO12415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4271-RA | 1..729 | 8..737 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:51:16 Download gff for
UFO12415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4271-RA | 6..740 | 1..737 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:56:21 Download gff for
UFO12415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4271-RA | 6..740 | 1..737 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:56:21 Download gff for
UFO12415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2285168..2285902 | 1..737 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:51:16 Download gff for
UFO12415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2285168..2285902 | 1..737 | 99 | == | Plus |
