UFO12417.5prime Sequence
1042 bp (954 high quality bases) assembled on 2012-10-19
> UFO12417.5prime
AGTCGACATGGGACGTGCTGTAAAAAATAATAGAGTAAGGTCGGCCCATT
GCAACAGTGCCGCCAAGGCGACGTCAATCAGTGGACATTCGATGCTAAAG
CAAAACAACGATTGCAATGGACGCAACCCGTTCTTTCAGTTTCTGGCCTA
CTTTCGAAAATGTTCCAACAACTGCCTTGGCCACTTGCCGTCGGATCGGG
TAACTCTAATTGCCGGCAAGGTGTGGAATTACATGAGTCTGTCGGAGAAA
GAACCCTTTATCGCTGCTGCGCGAAGATTTAACTACACGTATCGATCGCG
GAGCAGAAAAGTCAACTGGGTCCTGGCGCAACTGCGAAAATCCGCTGCTG
GGGAAGAATGCCGACCACAGGCACAGTGGATGTTGATGAACTTTTTAAAG
TCTTGGCAGGAATCTGTGGTGAGGAACCTTCTCGTCCTGGATCACAATCA
AAACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTG
GTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGA
TCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCG
GCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTG
GATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCC
CTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACAT
GGAAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAG
CACCTTGTCGCCTTGCGTATAATATTTGCCCATGTGAAAACGGGGGCGAA
GAAGTGTCCATATTGCCACGTTTAAATCAAACTGGTGAACTCACCAGGGA
TTGCCTGAACGAAACATATCTCATAACCCTTTAGGAATAGCCAGTTTCAC
CGTACACGCCACATCTGCGAATATATTGTGTAGACTGCGAATCGTCTGGA
TCACTTCGACCATGAAACGGTCAGTGCTCAAGTAACGGTTAC
UFO12417.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:17:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30356-RA | 538 | CG30356-RA | 37..483 | 8..454 | 2220 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:17:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8729019..8729465 | 454..8 | 2220 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:17:15 has no hits.
UFO12417.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-19 11:25:39 Download gff for
UFO12417.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30356-RA | 38..487 | 8..458 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:51:19 Download gff for
UFO12417.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30356-RA | 37..486 | 8..458 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:56:25 Download gff for
UFO12417.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30356-RA | 37..486 | 8..458 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:56:25 Download gff for
UFO12417.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8729019..8729465 | 8..454 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:51:19 Download gff for
UFO12417.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4616524..4616970 | 8..454 | 99 | | Minus |
