UFO12430.5prime Sequence
1061 bp (930 high quality bases) assembled on 2012-10-19
> UFO12430.5prime
AGTCGACATGCCGACCATCCGGCGGTGCTGCATCATCGGATGCTTGTCCA
ATTCGCGTCAGCACCCGAGTATGCAGTTCTTTGCGTTTCCCCGGCCGGAG
AACCCCTTCCACAAGCTGTGGAAGGAGGCGTGCCACGCCTCCCTAAGACG
AATTGTGCCCTTCAAAAAGCCAGTGGTATGTGCCCTGCACTTTGACCCCA
GTGTCTTGGGTGGCAGGCGACTGCAGTCGAATGCGCTGCCCACCCTGCGT
CTGGAAGTTCCCTCCAACCTGGAGGCCGTTGAGCAGCAGGCCATGGTGGA
GGAGATCGAGAGGAGCCGAAAGTGCGCCTACATCAATGCAGTGGTATACG
AATGGCTAGTAAGGGCCAATATCAATCCCCAGCTGCGAGGTAGCATTACC
CACGGAATGATCAAGGACAAGGCGGAGAATGCTTGACTAGTCATAGGGAG
CACATCCTTTATAGCAGACAATCGCTGGTTAAACCGTTTCCGAGAGACTC
ATCTTCAAGGCTTTGCCCAAAAACTAGCCAGCAACCAGTTGAAGCCACTA
GGATCCTCCCTGTGGATCCCGGACATCGTACAGGACCTAGCCCATCTCTT
TCCGCCCGCGAGCGCTGAAAGAGTGGCCAAACTGGAGGAGATGCCCGAGC
AGTACATGACCTACATGCAACAGTACGGAGAATACGAAGAAGATGATGAC
AGTATGGATGTAAAGGAGCAGAGCTATCCAGAGCAACAGCAGCAGCAACA
GCAGCACTTTGCTCTCCAGCAGCAACATATGCAACAGCAGCAGCATCAAA
TGGGCCACCCATGGCCACCGTTTCCAGGACATCCCGGGACATCCTACTCC
ACACCCCGGGTTCGCCAGCTTCAACGACTTTTTATTTCGAGCGGCATCAC
AGCAATGCACAGCAACTCCAGCAGCAGCAGCAGATGCATAGCTTACCCAC
CTATGCCACCTCAAAGGGAATCCTTTCAGCCCCAATGCCGCCTAATGTCC
CACGCAAGCGGGCCAGTTCCCTTCAGCCGTTCAGTTGCCCAAAAGACCAA
ATGGAGTCCCC
UFO12430.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:17:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13894-RA | 2193 | CG13894-RA | 401..1464 | 2..1058 | 4745 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:17:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 693824..694875 | 1048..2 | 4495 | 96.9 | Minus |
Blast to na_te.dros performed 2014-11-28 18:17:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2314..2362 | 890..938 | 109 | 74 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6768..6816 | 890..938 | 109 | 74 | Plus |
UFO12430.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-19 11:25:48 Download gff for
UFO12430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13894-RA | 398..1463 | 1..1058 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:51:42 Download gff for
UFO12430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13894-RA | 399..1464 | 1..1058 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:56:44 Download gff for
UFO12430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13894-RA | 399..1464 | 1..1058 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:56:44 Download gff for
UFO12430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 693825..694875 | 1..1047 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:51:42 Download gff for
UFO12430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 693825..694875 | 1..1047 | 97 | | Minus |
