UFO12433.5prime Sequence
545 bp (460 high quality bases) assembled on 2012-10-19
> UFO12433.5prime
CAATTTGGACAGTTCATTGCAGGCGCACAATAAATTGGAGAAGGAAGCCA
CCAATTTAGCTCTGCTGAAAGATCGAGTGGATAAATACCATGATCTGTCC
ACGCAAATGTCCAGTATTCTAACAATCTTCGAGAAGCGCCTGGGAAACCT
GGAGCAGACCATATTGCCCGTCTACCAGGAGACGGAGCAGCTCCAGAAAC
GGCAGCAGAATCTGGAAGCTACTCTCAATTGTCTGGAAAGCGTCCTGTCC
CACTACGATGTCTCCCAAGAGGTCTGCCAGTTGATTCATCAAGGCCCGGT
GGAGGGAAACATCTCGGTGTTCCTCGACGCACTAACCAAACTGCGCGATG
CCAACGATTACTTCCGGCACAACAATTCCCAGAGCGTGGAGCTGGAGAAT
GTCACCAGTTTGTTTAACACCGGCTGCGAAGGCCTGAGTCAGCACTATAG
TATGCTCCTCAAGAAGCACAGTGCTCCGCTGAAGCCGGTGGAGTTGCTGG
ATCCTTATCTACATAGAGGACGATTTCCCGTCGATGAATACCCCC
UFO12433.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:18:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Exo70-RA | 2284 | CG7127-RA | 116..653 | 1..541 | 2600 | 99.1 | Plus |
Oseg1-RB | 4766 | CG7161-RB | 200..528 | 541..210 | 1555 | 98.5 | Minus |
Oseg1-RB | 4766 | CG7161-RB | 599..766 | 209..42 | 840 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:18:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8412298..8412612 | 210..525 | 1515 | 99.4 | Plus |
3L | 28110227 | 3L | 8412060..8412227 | 42..209 | 840 | 100 | Plus |
3L | 28110227 | 3L | 8411966..8412009 | 1..44 | 220 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:18:03 has no hits.
UFO12433.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-19 11:25:50 Download gff for
UFO12433.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
exo70-RA | 114..654 | 1..545 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:51:48 Download gff for
UFO12433.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
exo70-RA | 116..656 | 1..545 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:56:49 Download gff for
UFO12433.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Exo70-RA | 116..656 | 1..545 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:56:49 Download gff for
UFO12433.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8411966..8412008 | 1..43 | 100 | -> | Plus |
3L | 8412062..8412227 | 44..209 | 100 | -> | Plus |
3L | 8412298..8412618 | 210..530 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:51:48 Download gff for
UFO12433.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8405398..8405718 | 210..530 | 98 | -> | Plus |
arm_3L | 8405066..8405108 | 1..43 | 100 | -> | Plus |
arm_3L | 8405162..8405327 | 44..209 | 100 | -> | Plus |