Clone UFO12433 Report

Search the DGRC for UFO12433

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:124
Well:33
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcriptexo70-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO12433.5prime Sequence

545 bp (460 high quality bases) assembled on 2012-10-19

> UFO12433.5prime
CAATTTGGACAGTTCATTGCAGGCGCACAATAAATTGGAGAAGGAAGCCA
CCAATTTAGCTCTGCTGAAAGATCGAGTGGATAAATACCATGATCTGTCC
ACGCAAATGTCCAGTATTCTAACAATCTTCGAGAAGCGCCTGGGAAACCT
GGAGCAGACCATATTGCCCGTCTACCAGGAGACGGAGCAGCTCCAGAAAC
GGCAGCAGAATCTGGAAGCTACTCTCAATTGTCTGGAAAGCGTCCTGTCC
CACTACGATGTCTCCCAAGAGGTCTGCCAGTTGATTCATCAAGGCCCGGT
GGAGGGAAACATCTCGGTGTTCCTCGACGCACTAACCAAACTGCGCGATG
CCAACGATTACTTCCGGCACAACAATTCCCAGAGCGTGGAGCTGGAGAAT
GTCACCAGTTTGTTTAACACCGGCTGCGAAGGCCTGAGTCAGCACTATAG
TATGCTCCTCAAGAAGCACAGTGCTCCGCTGAAGCCGGTGGAGTTGCTGG
ATCCTTATCTACATAGAGGACGATTTCCCGTCGATGAATACCCCC

UFO12433.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:18:03
Subject Length Description Subject Range Query Range Score Percent Strand
Exo70-RA 2284 CG7127-RA 116..653 1..541 2600 99.1 Plus
Oseg1-RB 4766 CG7161-RB 200..528 541..210 1555 98.5 Minus
Oseg1-RB 4766 CG7161-RB 599..766 209..42 840 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:18:02
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8412298..8412612 210..525 1515 99.4 Plus
3L 28110227 3L 8412060..8412227 42..209 840 100 Plus
3L 28110227 3L 8411966..8412009 1..44 220 100 Plus
Blast to na_te.dros performed on 2014-11-28 18:18:03 has no hits.

UFO12433.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-19 11:25:50 Download gff for UFO12433.5prime
Subject Subject Range Query Range Percent Splice Strand
exo70-RA 114..654 1..545 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:51:48 Download gff for UFO12433.5prime
Subject Subject Range Query Range Percent Splice Strand
exo70-RA 116..656 1..545 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:56:49 Download gff for UFO12433.5prime
Subject Subject Range Query Range Percent Splice Strand
Exo70-RA 116..656 1..545 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:56:49 Download gff for UFO12433.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 8411966..8412008 1..43 100 -> Plus
3L 8412062..8412227 44..209 100 -> Plus
3L 8412298..8412618 210..530 98 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:51:48 Download gff for UFO12433.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8405398..8405718 210..530 98 -> Plus
arm_3L 8405066..8405108 1..43 100 -> Plus
arm_3L 8405162..8405327 44..209 100 -> Plus