UFO12435.5prime Sequence
902 bp (819 high quality bases) assembled on 2012-10-19
> UFO12435.5prime
AGTCGACATGATGAGCTTCACCATTACCTTGGCGCTACTGCTCCTGGCAG
TTCTGATCCTGGGCATCTTGTTCGCCTGCCACTGTCTTGGTCCGCGGGCC
GCCAACTGGATGCGTATGCGATCCAGCAAGGAGGAAAAGATCGGACTATC
CAATCACAAGCAAAAGCTCTTCCATGCCAATGGTTATATGGCCAGTATAC
AATCCGGCTCCGAGTTCCTGCTGAGCACCAGTGGTAGTTTCAAGCGTTTC
GATACCATCGACAAGGAGGACTACAATCGCTCCCAGCAGACGCATCAGAC
GCATCTGTTCCTGATGAACGGCGGCGGTGCGGTTTCGATAACCGGATCAT
CCAGTGCCCTGCAGGCCACCACGGCCATGTGGCATCTACCGCGTTCGGGT
ATTAAGATTCCACCACCGCCCGATCGACCAGCTCCATCTCCGAATAGTGC
TGCAGCAGCCGGCAAAACGGTTACCTTCTCTTTGAGCCAGGTAAACGAGG
TCATCATGCCCGGCGAGCAGGTGACATCCAACGATCAGGAACGTCGCTCC
TGCCTGCGACAAAATGGTGGAACTGCGGGCGGTGCTGGCGGCGGTGGTGT
GCTGCCGCAGCCACTGGAGGCACCACCTCCGCCACGACTCACCGCATCGA
CGTCGGTGAACTTATCGGGTACGGCGATTCCAAGGCCCATTGCCAAGCGG
CAAGTGTCCACGCAGCCGGCCAACATAGCGGATGCCAGCCGGAGCAGACC
GTGTGACCCCGATGCGGGAGGTGAGAGAAAGCGCTGCCTTGAGCGTAGAA
CTCCAGCACTATCCGTTCTGTGGATCACGGACAGATACCCAGTATTCCCA
TTTCTGACTCTGATGCCCGGTGGCTTCTCTGGAAAACAACATTTCACAAT
GA
UFO12435.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:17:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Syt12-RA | 4823 | CG10617-RA | 242..1137 | 8..886 | 4035 | 97.9 | Plus |
| Syt12-RB | 4820 | CG10617-RB | 239..1134 | 8..886 | 4035 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:17:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13363584..13364160 | 197..771 | 2785 | 99.7 | Plus |
| X | 23542271 | X | 13363292..13363480 | 8..196 | 945 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:17:33 has no hits.
UFO12435.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-19 11:25:43 Download gff for
UFO12435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syt12-RA | 231..1152 | 1..899 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:51:30 Download gff for
UFO12435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syt12-RB | 230..1151 | 1..899 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:56:33 Download gff for
UFO12435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syt12-RB | 230..1151 | 1..899 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:56:33 Download gff for
UFO12435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13363283..13363480 | 1..196 | 97 | -> | Plus |
| X | 13363584..13364307 | 197..899 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:51:30 Download gff for
UFO12435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13257316..13257513 | 1..196 | 97 | -> | Plus |
| arm_X | 13257617..13258340 | 197..899 | 96 | | Plus |
