UFO12437.5prime Sequence
773 bp (675 high quality bases) assembled on 2012-10-19
> UFO12437.5prime
AGTCGACATGTTTTGGCATTTACTATGCGTTCCAAACGACGAAAATGCAT
CCGCGCCCGACGATGGAAATCAATCATGCCAGCCTTCTTCCAAACAAGAT
CAGTATCTAAGTCCTAACCGCAATTGCCAGAAAAACCTGTTGAGGCTTTA
CCCACCACCCCCATCTAAACCACCACCGCTCGTTGGTGCCATCCTGCAAA
CCCGTCTTCTGCATCAGATAAGCCCGTCCGCAATTGCAGATGCGGATGCA
GACTTGAATGCAGTAGGGGAGCTTCTATACCCAAATGTCCTGCAGCGGTC
AGCAACTTTGCCAGCGAAACACAACCGCTTAGGGGTTCGAAGCCGCGTGA
CCTTTAAGGTCTCTTCGTCTAACCTCCCTGCTCAGGATTCATATTCTCAT
CAACCCCGAAATCAGGTTGCAGTCGCTGCAAAGGACGGAATATTGGTAGA
CGTCAAGGCTAAGGAGTCCGTCAAGATGACTTCTGAGGATTTGCTGCAGC
CAGGTCATGTTGTGAAGGAGCGTTGGAAGGTTGTCCGTAATATTGGTGGA
GGCGGCTTTGGAGAGATATACGAGGGTCAAGATCTTATTACCCGTGATCA
AGTCGCACTTAAAGTAGAGTCCGCCCGGCAGCCTAAGCAGGTGCTCAAAA
TGGAAGTGGCAGTTCTTAAGAAATTTCAGGGAAAGGAGCACGTATGTCGA
TTCATCTGATGTGGGCGGAATGATCGATTTAACTATGTGGTGAATGCAGC
TCCATGAAAGAATTAACTGAATT
UFO12437.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:18:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Asator-RG | 3750 | CG11533-RG | 135..891 | 8..764 | 3650 | 98.9 | Plus |
| Asator-RE | 4104 | CG11533-RE | 135..891 | 8..764 | 3650 | 98.9 | Plus |
| Asator-RD | 5187 | CG11533-RD | 135..891 | 8..764 | 3650 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:18:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 481207..481704 | 531..34 | 2475 | 99.8 | Minus |
| 4 | 1348131 | 4 | 480918..481143 | 754..528 | 1025 | 97.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:18:05 has no hits.
UFO12437.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-19 11:25:51 Download gff for
UFO12437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Asator-RE | 92..867 | 1..773 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:51:50 Download gff for
UFO12437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Asator-RD | 126..901 | 1..773 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:56:51 Download gff for
UFO12437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Asator-RD | 126..901 | 1..773 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:56:51 Download gff for
UFO12437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 480897..481141 | 530..773 | 95 | <- | Minus |
| 4 | 481209..481704 | 34..529 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:51:50 Download gff for
UFO12437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 501523..501767 | 530..773 | 95 | <- | Minus |
| arm_4 | 501835..502330 | 34..529 | 99 | <- | Minus |
