UFO12438.5prime Sequence
999 bp (856 high quality bases) assembled on 2012-10-19
> UFO12438.5prime
AGTCGACATGTCATTGCAGTTGTTAAAAGCGCTACCCCACCTGCGCAGCG
CCACCACAGCCGTGAGAACTCAGATTGCAAGAACAACGTGGAGCGAGCAC
ATTGCCACGAAAGTGTTTTTTAGCACCACTACCACAAAACCTACTCCCTC
CGCACCACCACCACCTCCACCAACGCAACCGCAGCAGCCAGCTGCAACCA
CAAGTTGGGGCACCAAGAAGCAAAATAGAAAGGTAAAACTAAGATCCGCC
GCTGCCGAGTTCATCATGTCGAATCCCGAGATTGAGGCTCAACTTGCCCC
ATTGAGGGAACGAGTTCAGGAGCAGGGTAACCTGGTGAGGGATCTCAAGG
CGAAGGGTGCCCCCGAGATCGATGTGAAAAAGGCAGTAGCCGAGCTGAAG
GCACGCAAGAAGCTGCTGGAGGACAAAGAGCTCGCTCTGACCCCCAGTGT
CGTTAGTTTCGATCGCGCGAAGATGGAGGATCTACTCAAGCGTCGCTTCT
TCTACGACCAGAGTTTCGCAATTTATGGCGGCATCACCGGCCAGTACGAT
TTTGGACCCATGGGCTGTGCCCTCAAGTCCAACATTCTGGCCCTATGGCG
TCAGTATTTCGCCCTCGAAGAGCAAATGCTGGAGGTGGACTGCTCTATTC
TGACTCCCGAACCTGTGCTCAAGCCTCTGGTCACGTGGAGCGTTTCGCTG
ATCTGATGGTCAAGGATGTCAGACCGGCGAGTGCTTCCGCCTGGATCATC
TCATTAAGCAGCTTTGGAAAAGCTATCTAAGGCCAGATGCACTCCCGCCT
GCAAGCCGAGTGTGAGATATTATCATTAACTGATGCCTGAACACAGGAAT
GCTGGTGTCTGCCAATACAACATCAATCTCCATTCGCATGATTAACAGAC
CGATGAGTTCCACCTGATGTTTGCCACCCAATGGACCCTGCTTGGTCAAG
GATCTGCGCCGAACTGCCAGGAATTTCCTCACTTCCAGGATGGTGAATT
UFO12438.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:18:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-gly-RC | 2476 | CG6778-RC | 52..1027 | 8..951 | 4090 | 96.3 | Plus |
| Aats-gly-RB | 2545 | CG6778-RB | 121..1096 | 8..951 | 4090 | 96.3 | Plus |
| Aats-gly-RA | 2457 | CG6778-RA | 43..1008 | 18..951 | 4040 | 96.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:18:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15095262..15096091 | 8..829 | 3740 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:18:08 has no hits.
UFO12438.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-19 11:25:52 Download gff for
UFO12438.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-gly-RB | 76..1073 | 3..963 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:51:52 Download gff for
UFO12438.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-gly-RB | 116..1113 | 3..963 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:56:53 Download gff for
UFO12438.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-gly-RB | 116..1113 | 3..963 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:56:53 Download gff for
UFO12438.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15095257..15096254 | 3..963 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:51:52 Download gff for
UFO12438.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15088357..15089354 | 3..963 | 95 | | Plus |
