UFO12452.5prime Sequence
1072 bp (953 high quality bases) assembled on 2012-10-19
> UFO12452.5prime
AGTCGACATGCTGTTGCGCGGCGTGCAGATCCTGCAGCGAAGACACCAGC
ACTTGGGAAAGGCTTTTAGCCAGTGCTCCTTACGTCAAGACGGCAGGAAC
CCTTGGAGGCGGCATGACGGCGAGGCATTCAAACTACAGCCGTGGAAGCG
ACCAAGCACGTTCCTTCAGTTTCGCTGCAGCGCCAATGGCAGTGATTCCA
AGAAGGAAAAACCTGTGCAGGAGGAGGCCACCGCTGGTCCAGTTGCCAAG
CCAAAGGAAACGAAAAACTTTGAGGTGAAGACCACAAAGGGCATCCTGTC
TATCAGCACCACCATCGAGGACTCCAAAATTAACGAGATTGTGTTTGAAA
AATCCGATCTGCCACCGGTAACGAAGGTGAAAGAGCCGGTTTTGGCCGCA
AGTGCCATTAATCTACGTTCTACGTCTACTGGAGTAGCAACTGGTGCTGT
AGGATTGGGAGAGAGCTCTGGTTCTGTTATGAATCCTCCTGAAACAGTGA
AAAGCGCACCTAAAAATTCTCCGTCTGGTGCTGTGCTAGCTGAAAAGGCG
GGAGAAGGTATTCGAACATCCCCACCTGCAGAGGTAACGCCTCCAGCGCC
TGTGATTCCTCTAAAGCGACCCCGATTCGATTATCGTGCTTCCCTAGAGC
GCAACTTTGTGACCCCCAACCGGGCCATCAGCGATTTCTTGTTGACCGCT
GCTCAACTCGAAAGTCTGCCCAAGATCAAGCGGAGATCGCCGTACGAGCA
GGAGCCACCCATGACTGTCTACTGGCGACGGGATGTGGAGGCTAAAGCCG
TCGAAGTGTGGGGGTCCAAGGAAAATCTGTTGCGGAGCGACTCAGCGGGA
GTGGAGCGCAAGCAATACCAGCAGAATCTATTTCACTGTTAACGCCGTTG
CGTGACTACCGCAAGGAAATGGGATCTCGACCAAAGTTATGCTCGACACA
GAAAGAGTCGAGAGTCCGGCCAGTGTGCCACCGCCATCGCTATCATGCCA
CCAATTGCTTTTCAGCAGAGTTGCTGTACGCGGGTTCTCAAGCATGTGCA
GAGTATCCATCTGGCGACTATC
UFO12452.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:18:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ZnT49B-RA | 2534 | CG8632-RA | 330..1389 | 8..1047 | 4615 | 97.1 | Plus |
| ZnT49B-RB | 2549 | CG8632-RB | 330..1404 | 8..1047 | 4460 | 95.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:18:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12653188..12654058 | 8..875 | 4190 | 99.5 | Plus |
| 2R | 25286936 | 2R | 12654148..12654200 | 897..948 | 185 | 94.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:18:32 has no hits.
UFO12452.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-19 11:25:57 Download gff for
UFO12452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8632-RA | 325..1348 | 1..1014 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:52:06 Download gff for
UFO12452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8632-RA | 327..1350 | 1..1014 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:57:06 Download gff for
UFO12452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ZnT49B-RA | 327..1350 | 1..1014 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:57:06 Download gff for
UFO12452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12653180..12654058 | 1..875 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:52:06 Download gff for
UFO12452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8540685..8541563 | 1..875 | 99 | -> | Plus |
