UFO12459.5prime Sequence
1087 bp (976 high quality bases) assembled on 2012-10-19
> UFO12459.5prime
AGTCGACATGAACAGTTCCAAAAACGATGTCCGTTCTTCCTTTAAATACG
GGCCAGCTGTCCGGATCGGAATCGCCGTCCTGGTGCTCCACACCGTCGGC
TGGCTGGGTTGGAAGGCGGTGAACCAGGGTGCGGAATCCAAGGAGGCAGC
AGCGAAGGCCCAGCAAGAACAATTGCGAGCGGTATTCGCAGAAAAGGCAA
GCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAAT
CATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTC
ATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGA
GCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATC
AACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACT
CATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCA
TCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTC
GCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGT
CCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTG
GCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAG
GTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCC
GGAAATCGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGC
TCATGGAAAACGGTGTACAAGGGTGAACACTATCCCATATCACCAGCTCA
CCGTCTTTCATTGCCATACGAATTCCGGATGAGCATTCATCAGCGGGCAA
GATGTGATAAAGGCCTGATAACTTGTGCTTATTTTTTCTTTACGGTCTTT
AAAAGTCGTATATCCAGCTGACGTCTGTATAGTACATGAGCAACTGACTG
AATGCTCAATGTTCTACGATGCATGGATATCACGGGGTAATCCCAGGATT
TTTCCTCATTAGCTTCTAGACCTGAAGATCCTAACTT
UFO12459.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:18:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43107-RA | 371 | CG43107-RA | 45..233 | 8..196 | 945 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:18:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17140633..17140821 | 196..8 | 945 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:18:14 has no hits.
UFO12459.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-19 11:25:54 Download gff for
UFO12459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43107-RA | 59..247 | 8..196 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:51:56 Download gff for
UFO12459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43107-RA | 59..247 | 8..196 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:56:57 Download gff for
UFO12459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43107-RA | 45..233 | 8..196 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 18:56:57 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 21:51:56 has no hits.
