UFO12465.5prime Sequence
1041 bp (954 high quality bases) assembled on 2012-10-19
> UFO12465.5prime
GTCGACATGTCGGCGGCCCGCCTGCCCTACTATCAGCGGGATCAGGAGGA
CGGCCACCAGCGGCGCGCCGCACGCGGCCATCAGCGCGGCTACTACGAGC
GTGGCTCTGGTTCCGGATCCTCCAGACGAGAGCACAGTCGCTACAGTCGC
AGCCGTTCGCGTTCCCGCAGTCGCAGCCGCTCCGCCGAACGCTTTGGCCA
GCGTCGCCGCCACCAGAAACGGCAGTCATCCCGTTACCACAGAGACCGCG
ACTCCAGAGATCGCTCCCGAGATCGCTCCCGAGATCGCTCTAGGGATCGC
GAACGTGATCGCGATAGGGACCACTCAAGGCGCTCCAGCCACTATCGACG
CTCGGAATCGCCGTCCTCTTCTGACATTGGCCATGGATCCAACAACAGTC
AACGAAGAGGCCACCATGCATCATCATCCAGTAAATCGGAGCTAAGCGCC
GTACAGAAGGCAGCCGCTGCAGCTGCCGCCGCCACAAATCAAGTCCAGTT
GGCTGGCAAGAGCAGTGCCGCGTCCGCGGTGGGCGCCTACTACAACCTGG
ACACCGACGAGCCCTTTGACAAGGAGCGCATCCACCGCGAAATGGAGCAG
AAGCTGCGCGAAGCACTGGCCAGGGAGGGCAAAGTGTATCCGCCGCCAAA
GCCTGAGCCACCATCGCATCCTGTCTTCGCCAACGACGGCTCGTTCATGG
AGCTGTTTAAGAAGATGCACGAGGGCCAAAAGCAGCAAGCGACCAGCCAG
TTGATGCAGCCATCGGTCAAAGAGGTCCTGCAGCAGCAGTTGGTTCCGCC
GGAGGCGGCCTCCACAGGGCCCTGCACTGCCGGCCATTGCATTGGGAGCT
GCCCAGCAGTGCTGCGGCGCCGTACATTGCTGCCGCGCGGCCGGAAGCTG
GCGCGCCGCACCATCGTGGGGACGACGTCGCGGCGGAAAGTTCTCAAAAC
TGGCGTATTGTAAATGTGAAGACGCCCCATTGAGAGCGACGTGACCCGGA
TGACTTTCTTGGTTCGTTGTACTTGACCGAGTCACCAGTTA
UFO12465.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:19:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18809-RD | 1783 | CG18809-RD | 135..1164 | 3..1031 | 4660 | 97.6 | Plus |
| CG18809-RC | 2557 | CG18809-RC | 909..1938 | 3..1031 | 4660 | 97.6 | Plus |
| CG18809-RB | 2006 | CG18809-RB | 358..1387 | 3..1031 | 4660 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:19:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19741879..19742872 | 993..3 | 4370 | 98.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:19:43 has no hits.
UFO12465.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-19 11:26:05 Download gff for
UFO12465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18809-RB | 359..1373 | 1..1013 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:52:47 Download gff for
UFO12465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18809-RB | 359..1373 | 1..1013 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:57:41 Download gff for
UFO12465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18809-RB | 356..1370 | 1..1013 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:57:41 Download gff for
UFO12465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19741860..19742872 | 1..1013 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:52:47 Download gff for
UFO12465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19635893..19636905 | 1..1013 | 97 | | Minus |
