UFO12502.5prime Sequence
1032 bp (858 high quality bases) assembled on 2012-11-02
> UFO12502.5prime
AGTCGACATGTTCAACAATATTTTCGGAAAGAAACCCACCGTGAAGGAGC
AGCAGCGGGAGAATGACCGATCGCTGCGCAAGGCCACCAGGGACATCGAA
CGGGAGCGCAGGAAAATGGAGGAGGAGGAGCGCAAGCTGGAGCTGGAGAT
CCGACGGAATGCCGCCGCTGGGAACAACGATGCCTGCCGCATTCTGGCCA
AGCAGCTGGTGGAGATCAGGAAGCAGAAATCACGCACATACGCAGCAGCG
GGCAAGATTCAGTCCATTGGCTACCAGAACAAGAACATGGGCGCCAATAT
CGCCCTAAGCGAAGCCATGGGCACCACGGCCAAGACGATGGGTGAAATGA
ATAAGGTGATGCGACCGGAGGCCATCGGGGAAACAGTGCGCCAGTTCCAG
GCGGCCAACATGAAGATGGAAATGACCGACGAGATGATCAACGACACGCT
GGACGACATGCTGAATGAGTCCGGCGACGAGGAGGAGTCCAATGCCGTAG
TCAACAAGGTGCTCGACGAGATCGGCATCGAGATCTCCGGCAAGATGTCC
AGCATCCCGGCCACGGGATCCTCAGACTTTGAGACGAGTGGCAAGCGCAC
CGAGAAGGACATTGCCGATCAACTGGCCAAGCTGCGATCCTCTGCAAGCT
TTCTAGACCATTCGTTGGCGCGCGGGCCAGGTAAGTGGTCATAATCATAA
TCATAATCATAATCATAATCACACTAGCCTAGAGATCCTGTCATGACTAG
TGCTTGATCTCACATAAAACGCCGCGCACGAGCGTCTGACATCAGATGAG
TCTGAGCATATGTCACAAGATCACAGCATCATAGCCGCTGCTCTCATATG
TGATCTACTCGATGACTCAAGTGACACAGTACTGTGATCGAGATTGTAGC
TGATCAGTCTAGGTCATGGGCTAGAGTCAGTGTCATGTGACGGTGGTGCC
CTGTGCCACCTTCACATCTGAGAGAGTAACTGGTTGCTCAATTCATTTAG
GTCGATTTCTGGTCCCGAACCATGGGAAGGCC
UFO12502.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:30:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CHMP2B-RA | 855 | CG4618-RA | 127..762 | 8..643 | 3165 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:30:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5139745..5140380 | 8..643 | 3165 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:30:18 has no hits.
UFO12502.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-11-02 13:58:05 Download gff for
UFO12502.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CHMP2B-RA | 73..708 | 8..643 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:14 Download gff for
UFO12502.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CHMP2B-RA | 127..762 | 8..643 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:03:28 Download gff for
UFO12502.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CHMP2B-RA | 127..762 | 8..643 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:03:28 Download gff for
UFO12502.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5139745..5140380 | 8..643 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:14 Download gff for
UFO12502.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5132845..5133480 | 8..643 | 99 | == | Plus |
