UFO12504.5prime Sequence
1025 bp (898 high quality bases) assembled on 2012-11-02
> UFO12504.5prime
AGTCGACATGGATATAAGTGTCTTTGAATGGAAGAAAGTGGATCTTTTCA
ATATAATCGTCGTACCATTTGTAAAAATTCCGAACACGGCAGAAATATCG
TGCTACTGCTTTCCCGAATCAAAATCAAGCACTGAGGAAAGAAATATAAA
ATTAGTAATTTGTGATAAGAACAGAAATATTCTTATTTACCTTTCAAATT
GGGAGTGTATTACCTTCAAATCTCCATCCACGCGGAAAGCTATTGCTCTT
TGTTCCCTTACCAGCAATAACAGCCTTGCGACTGTCACACCGGATATCAA
TAATGGTATTCACATTGATATATTTGACCTTAATAGATTAACAAAAAAGC
AAGCAGCTCCAATAATTGCATCTGCATATACTCAGCCTTCAAGTACGCCC
TTATGCCTCAACGCAGACGTCATTGACGATAAATTGTTTGCGTTGGCGAT
AGGATTGGGAAATGGTGATATTCTTTTGCATTATGGAAAAATCACAAAAA
ATTTTTCTGCAAATATTCGCCAACATACTGTTTCTGGAAACGCAGTCAAT
GGAATACATTTTGATTTCAAAACACAACCTTTAGATACAACTCAAATAAT
GTTTGTGACATGTGTTCAAGGAGTTTATTGTTTTATGTTAAAAGAGAAAT
GCATAATGGATACAAAATTTGTACTTGATATGATAAGGTATCTTATTACC
GCAGTATATGTGCAAGCTGGAGTGGCGAATAATGATCATGTGGTTGTGGG
ACGGCAGACGCTGTTATGCTACACTCTGAGGGAGGGTCTTGTTTGCTATC
GAGAGCAAAGATGCTGCTGGGTAGCATACTATCGTCGCGTCAAATCAACT
AAGCAGATGCACGACACTATTGTTAGATACGAAACAATATAGTTTCAAGC
ATTCAGATTGTTTATGATCATGAACATTTGTATTGTACGATCGCGACGAG
CTGACTGTATTAAAACGCAATTATACGTCTATGAAACTAGTAATGATGAT
TGGACGAGTACTCCCGATGTGCATC
UFO12504.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:30:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32350-RA | 2844 | CG32350-RA | 113..937 | 8..810 | 3595 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:30:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 23149715..23150387 | 680..8 | 3365 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:30:24 has no hits.
UFO12504.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-11-02 13:58:05 Download gff for
UFO12504.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32350-RA | 96..897 | 1..786 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:20 Download gff for
UFO12504.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32350-RA | 106..907 | 1..786 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:03:31 Download gff for
UFO12504.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32350-RA | 106..907 | 1..786 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:03:31 Download gff for
UFO12504.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 23149592..23150390 | 1..786 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:20 Download gff for
UFO12504.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 23142692..23143490 | 1..786 | 97 | | Minus |
