UFO12509.5prime Sequence
268 bp (213 high quality bases) assembled on 2012-11-02
> UFO12509.5prime
GTCGACATGGTGCCGAACGAGAAAAGCTTTCCCCGAGGCGGGACAATCCA
CAGCGAAGTCAAAACCGACGACGTGAGCCTGAATATCGTTTTCGGTGCCT
CGCAGAAGAAGGTGAAGAAGGCGCCGAAAGTAAAAGAGAACCTTCTGAGC
TACGAAACCGAGGAACAAAATGGCCAACTGGAGGCCTTCTCCGCGGGAAA
CGCTTCAATATGGGACCCGGCTGCAGGGAGGGACAATGCTGGGTTCATTG
GGGGAGGTGGGCTCAAGG
UFO12509.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:30:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5728-RA | 4622 | CG5728-RA | 96..312 | 7..227 | 990 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:30:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 24332976..24333084 | 196..88 | 545 | 100 | Minus |
3R | 32079331 | 3R | 24333139..24333221 | 89..7 | 415 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:30:47 has no hits.
UFO12509.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-11-02 13:58:08 Download gff for
UFO12509.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5728-RA | 89..322 | 1..242 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:33 Download gff for
UFO12509.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5728-RA | 91..324 | 1..242 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:03:43 Download gff for
UFO12509.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5728-RA | 91..324 | 1..242 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:03:43 Download gff for
UFO12509.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24333141..24333223 | 1..87 | 95 | | Minus |
3R | 24332926..24333084 | 88..254 | 92 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:33 Download gff for
UFO12509.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20158863..20158945 | 1..87 | 95 | | Minus |
arm_3R | 20158648..20158806 | 88..254 | 92 | <- | Minus |