Clone UFO12521 Report

Search the DGRC for UFO12521

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:125
Well:21
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcripttlk-RF
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO12521.5prime Sequence

1007 bp (860 high quality bases) assembled on 2012-11-02

> UFO12521.5prime
AGTCGACATGGATCAATTTCAAACTTCACTAAATCCGCGGAAACTCGAGC
TTCTGGAGTCTCGAATTACTGGAGTGCGGATGTCCCCCGGCGCCCATTTG
CAGATGTCCCCGCAGAACACTTCGTCCCTAAGTCAACACCATCCACATCA
ACAGCAACAGTTACAACCCCCACAGCAGCAACAACAGCATTTCCCTAACC
ATCACAGCGCCCAGCAACAGTCGCAGCAGCAGCAGCAACAGGAGCAACAG
AATCCCCAGCAGCAGGCGCAACAGCAGCAGCAGATACTCCCACATCAACA
TTTGCAGCACCTGCACAAGCATCCGCATCAGCTGCAACTGCATCAGCAGC
AGCAACAACAACTCCACCAGCAACAGCAGCAACACTTCCACCAGCAGTCG
CTGCAAGGGCTGCATCAGGGTAGCAGCAATCCGGATTCGAATATGAGCAC
TGGCTCCTCGCATAGCGAGAAGGATGTCAATGATATGCTGAGTGGCGGTG
CAGCAACGCCAGGAGCTGCAGCAGCAGCGATTCAACAGCAACATCCCGCC
TTTGCGCCCACACTGGGAATGCAGCAACCACCGCCGCCCCCACCTCAACA
CTCCAATAATGGAGGCGAGATGGGCTACTTGTCGGCAGGCACGACCACGA
CGACGTCGGTGTTAACGGAAGGCAAGCCTCGCACGCCAGTGGAGCGGAAA
CGGAAGCGAAAAATGCCTCCATGTGCCACTAGTGCGGATGACGCGGGGAG
TGGCGGTGGCTCTGGCGGATCAGGAGCAACCGTTGTTAACAACAGCAGCC
TGAAGGGCAAATCATTGGCCTTTCGTGATATGCCCCACGGTAAACATGAG
CCTGATCTGGGCGATCGTCTGGGAGGATTTGCAGAAGCGAGTAGAGCCGG
TGGCGCCGGAGCGGGGAGTGCGCTGTTCCGTTCTGGAAGCGGTGGCCGCA
AGCGCCCCGCCTGTATGCTGCCAGTCAGCGACAACAGGAAGATTCAACGA
ACTATTT

UFO12521.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:31:41
Subject Length Description Subject Range Query Range Score Percent Strand
tlk-RJ 4882 CG34412-RJ 517..1523 8..1007 4515 97.4 Plus
tlk-RH 5890 CG34412-RH 517..1523 8..1007 4515 97.4 Plus
tlk-RF 6513 CG34412-RF 299..1305 8..1007 4515 97.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:31:38
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 3781654..3782577 79..993 3855 96.2 Plus
X 23542271 X 3721576..3721647 8..79 360 100 Plus
Blast to na_te.dros performed 2014-11-28 18:31:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2316..2545 134..363 465 68 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2576..2988 129..545 390 58.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..6951 134..360 387 66.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6758..7016 134..395 375 63 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2364..2781 134..545 367 59.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6791..7200 134..543 306 59.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6869..7112 134..383 218 59.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2336..2428 500..600 135 64.4 Plus

UFO12521.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-11-02 13:58:13 Download gff for UFO12521.5prime
Subject Subject Range Query Range Percent Splice Strand
tlk-RJ 264..1274 1..1007 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:03 Download gff for UFO12521.5prime
Subject Subject Range Query Range Percent Splice Strand
tlk-RF 295..1305 1..1007 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:04:10 Download gff for UFO12521.5prime
Subject Subject Range Query Range Percent Splice Strand
tlk-RF 295..1305 1..1007 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:04:10 Download gff for UFO12521.5prime
Subject Subject Range Query Range Percent Splice Strand
X 3721572..3721647 1..79 96 -> Plus
X 3781655..3782589 80..1007 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:03 Download gff for UFO12521.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 3615605..3615680 1..79 96 -> Plus
arm_X 3675688..3676622 80..1007 97   Plus