UFO12535.5prime Sequence
187 bp (154 high quality bases) assembled on 2012-11-02
> UFO12535.5prime
GTCGACATGCAGTGGCTTACACTTATTTTGGTGGGGCTGTTTGCCTCGTT
CTTATCAATATCGATGTGCGTGGCTGTGCAGCCGCCCGATGATGGAAAAT
TGCGTGTTTGTGTGGTGGAATCGCGTGGCGTTTATCGGAAAACCCCCAAG
TTCTGTTCCGCCTGCCTGGGAGGGCGGAAAGAGGCAA
UFO12535.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:31:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tsf3-RA | 2377 | CG3666-RA | 143..292 | 7..156 | 750 | 100 | Plus |
CG15706-RF | 2419 | CG15706-RF | 394..487 | 100..7 | 470 | 100 | Minus |
CG15706-RD | 2578 | CG15706-RD | 642..721 | 100..21 | 400 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:31:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16226643..16226736 | 7..100 | 470 | 100 | Plus |
2R | 25286936 | 2R | 16227592..16227647 | 101..156 | 280 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:31:53 has no hits.
UFO12535.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-11-02 13:58:14 Download gff for
UFO12535.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsf3-RA | 111..282 | 1..176 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:10 Download gff for
UFO12535.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsf3-RA | 136..307 | 1..176 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:04:16 Download gff for
UFO12535.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsf3-RA | 136..307 | 1..176 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:04:16 Download gff for
UFO12535.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16226636..16226736 | 1..100 | 97 | -> | Plus |
2R | 16227592..16227662 | 101..176 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:10 Download gff for
UFO12535.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12114141..12114241 | 1..100 | 97 | -> | Plus |
arm_2R | 12115097..12115167 | 101..176 | 93 | | Plus |