UFO12544.5prime Sequence
1103 bp (967 high quality bases) assembled on 2012-11-02
> UFO12544.5prime
AGTCGACATGGTCAACGCTTTGTGGGCCACGTTAATATCGCTCACTTTAA
TCGGCCGTGTTTTAGCCAACGATCTATTTTCCCTGCCACCCGCCACGAAT
CACAGAGAGGAAATGCTCGAGGATTATGGACGTTTCCTGCTGTCCACCAT
GAACAGGACCATCGATCCGTGCGAGAACTTTTACGAATTCAGTTGTGGCG
GTTGGAAGAAGGCGGATTTGGTACCGGAACAGGCCAGGAATACCAGTTTT
CTAAACGCAATCCAGCACAAAATCGACGAGCAGATTCAGGGATTCCTGCA
GAATGCCACCAAAAGAGAGTTGGAGGATCTGGGAGTTAATGGCACCACGT
CGGCGGAGATTAAAGCCAAGCAATTCTATGCCAGCTGTGTGGAAATGAAG
GCCAACTTGTCGTTGGGTTATCAATATTTTATGGAACACGATGGGGATCG
CTTAAAGGAGCGCAATGCGACCTACGATTGGATGTACATCAACTTTATGT
CCAAATACGACATATATCCTTTGCTAGCGCTCAAAGTTCACTATAGTACT
TCTTCGAGGAAGTTCGATATACTTTTAACGCTTCCCAGTAAAGTTTTAGC
TGGTTTCAGTGAGGAGCAGTTGAAAAATATGACCAGAGAGTTTGGCTTGG
ATTCAAGTGCAGAGAAAGTCAAGCAATTTGTGGAGAACTTTAACAATCTA
ACGCAATTTGAAAGAAATTTAGTTTCCTTAGCCAAAAGTCGCAATGAAAC
AGAGCAGTTGAATTTCAAGGAATTTCTGGTGAAGCATAAACACGATCGTT
TGAGTTGGACACGATTTTTTGAACTGGCTTCATGGCAGTCAGAGTCCCAC
TGGCCAGTGCTCATCAATTGATATATCACGATTTGTTTCTTCTGACAACA
ATCTGAACGTTAAAAGTTTATAAAATGCAGAAGCTGGTCAGTTTTATGGC
TTGTGAAACTCAACTAAACAGGGGGAGTCAAGTGATGTCGCTCTTGTCGG
AATGGTATTTATTACCTTGTGCTGTATGACGGGTCGATAAGGAAGGCCGC
AATTCCTGATGTACCAGACTAGACCGTCTATGATTCCTGACTTCACTGGT
GGG
UFO12544.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:33:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15485-RB | 2107 | CG15485-RB | 80..1102 | 7..1001 | 4410 | 96.9 | Plus |
| CG15485-RA | 2467 | CG15485-RA | 440..1462 | 7..1001 | 4410 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:33:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12668416..12669275 | 863..7 | 4140 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:33:10 has no hits.
UFO12544.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-11-02 13:58:22 Download gff for
UFO12544.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15485-RA | 433..1328 | 1..888 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:53 Download gff for
UFO12544.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15485-RA | 433..1328 | 1..888 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:04:57 Download gff for
UFO12544.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15485-RA | 433..1328 | 1..888 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:04:57 Download gff for
UFO12544.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12668386..12669277 | 1..888 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:53 Download gff for
UFO12544.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12668386..12669277 | 1..888 | 98 | | Minus |
