UFO12548.5prime Sequence
232 bp (184 high quality bases) assembled on 2012-11-02
> UFO12548.5prime
AGTCGACATGTCTAGTGCCAGGCTACTCGAGTCGCAGACATCCGACGAGG
ATAACGAGGACATCGAGCGGCGGCCTCACCAGAGCCATTCACGCAGCTGC
AGCAACAACACCACCCCCACCCATCCACCACATCCCATGGTCAGGAAGGG
GGGTGTGGCCAGGAGGATCTGCCTGATAGGTGGGGGCACTGGTTCCTGCT
TCCTCGTCGCCCCTCCTGCTTACCCTCAACCC
UFO12548.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:32:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GlcAT-S-RC | 2116 | CG3881-RC | 495..696 | 8..212 | 950 | 98.5 | Plus |
| GlcAT-S-RB | 2406 | CG3881-RB | 495..696 | 8..212 | 950 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:32:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9617330..9617507 | 8..185 | 890 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 18:32:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2456..2496 | 93..134 | 108 | 76.2 | Plus |
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7947..7988 | 82..121 | 106 | 76.2 | Plus |
| TART-C | 11124 | TART-C TARTC 11124bp | 9391..9432 | 82..121 | 106 | 76.2 | Plus |
UFO12548.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-11-02 13:58:18 Download gff for
UFO12548.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlcAT-S-RB | 488..709 | 1..232 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:29 Download gff for
UFO12548.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlcAT-S-RB | 490..711 | 1..232 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:04:35 Download gff for
UFO12548.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlcAT-S-RB | 490..711 | 1..232 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:04:35 Download gff for
UFO12548.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9617325..9617546 | 1..232 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:29 Download gff for
UFO12548.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9617325..9617546 | 1..232 | 94 | | Plus |
