UFO12554.5prime Sequence
1015 bp (964 high quality bases) assembled on 2012-11-02
> UFO12554.5prime
AGTCGACATGATGGAAAATTACGAGGAAATTCGCCTGGGCCACATTAGGT
CTAAAGATCTGGGCAACCAGGTGCCAGACACTACGCAATTCTATCCGCCA
ACTAAGTTTGATTTTGGCGCGGAAATTCTGGCCTCAACGTCAACAGAGGC
AGAGGCAGAGGCAGAAGCAACAGCAACAACCACAGAACCAGCAACAAGCG
AACTTGCTGGCAAAGCAAATGGTGAAATCAAAACAAAAACATTGGCTGCC
AGGGAAGAACAAGAGATTGGCGCCAATTTGGAGCATAAAACCAAAAATCC
CACAAAGTCAATGGGCGAGGATGAAGATGACGAGGAGGAGGAGGAAGAGG
ACGATGAGGAGGAGGAGGAGGACGACGAGGAGGGAATCACCGGAACGAGC
AACGAGGATGAGGACTCCAGCTCAAATTGCTCCTCATCCGTGGAACCCGA
CTGGAAGCTGCGCTGGTTGCAACGAGAATTTTACACAGGTCGTGTGCCGC
GCCAGGTTATTGCCAGCATTATGCCGCATTTCGCCACCGGCCTGGCGGGC
GACACCGACGACTCCGTGCTGTGGGACTATTTGGCCCACCTGTTGAACGA
GCCGAAGCGGCGCAACAAGCTGGCCTCAGTGAACACCTTCGACGATGTCA
TCAGTTTGGTCAAGAAATCACAGAAGATCATTGTGCTAACGGGAGCCGGA
GTATCCGTCTCCTGCGGCATTCCGGACTTCCGGTCCACCAATGGCATATA
TGCGCGATTGGCCCATGATTTTCCCGATCTGCCCGATCCGCAGCCATGTT
TGATATCAACTACTTCAAGAGGGATCCACGACCGTTCTACAAGTTTGCCC
GCGAGATATATCCCGGCGAGTTTCAGCCCTCACCCTGCCATCGTTTCATC
AAATGCTGGAGACCAAGGGCAACTGTTGCGCAACTACACACAGAACATCG
ACACCCCTCCAGCGGGTGGCAGCATCAGCGAGTAATCGAGTGTCGGGTTC
TTTCAACGGCCCCTG
UFO12554.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:34:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sir2-RA | 3809 | CG5216-RA | 428..1438 | 8..1011 | 4800 | 98.8 | Plus |
| DnaJ-H-RB | 2035 | CG9828-RB | 1..82 | 89..8 | 410 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:34:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13165991..13166981 | 8..994 | 4650 | 99.1 | Plus |
Blast to na_te.dros performed 2014-11-28 18:34:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6781..6846 | 131..196 | 159 | 71.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2346..2476 | 135..264 | 157 | 60.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6727..6813 | 131..217 | 147 | 63.2 | Plus |
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3284..3375 | 149..241 | 147 | 64.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2312..2437 | 149..270 | 144 | 60.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2360..2486 | 131..251 | 142 | 61.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2348..2413 | 131..196 | 141 | 68.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6748..6813 | 131..196 | 141 | 68.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6793 | 149..218 | 134 | 65.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6847..6912 | 131..196 | 123 | 65.2 | Plus |
UFO12554.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-11-02 13:58:28 Download gff for
UFO12554.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sir2-RA | 441..1441 | 8..1003 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:01:27 Download gff for
UFO12554.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sir2-RA | 428..1428 | 8..1003 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:05:27 Download gff for
UFO12554.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sir2-RA | 428..1428 | 8..1003 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:05:27 Download gff for
UFO12554.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13165991..13166991 | 8..1003 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:01:27 Download gff for
UFO12554.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13165991..13166991 | 8..1003 | 98 | | Plus |
