UFO12558.5prime Sequence
1047 bp (856 high quality bases) assembled on 2012-11-02
> UFO12558.5prime
AGTCGACATGTCTATCTCAGTGAAGCGGAAAACGGTGATTTCACCGCAGG
AACTCCTGAAGACACTCGAGCTGTCCGGCGAAGAGGACCTCGATCTGCAG
ATCAAGAACTGGGTGATGTGGGACCGCAACGAGGCGACGCTCCAGCAGGT
GACTGAGGCAGTCAGGGATCAGGATTGGAAGGCGTTGCGGGTGAGACTGT
GCCATAGGATCACCTATTTGACAACTGGCTTGAGGGGAGTGATGCGCGCA
GGCTTCGACTCTTTGAACGATGTGGTGATCATCGAAGTGGCCCAGGGCAT
CTGCGCCTACCTCGTCGATGCCTATCCAAGCATCCAGAAGAGGCAAACAC
AGGGCGTGGTCGTTGGCTACGATGGCAGGTACAATAGCAAGCGGTTTGCC
CAACTCATCGCCACCGTGTTCCTGAACAACGACTTCAAGGTGTTCCTCTT
CACTCGGATGATTCCGACACCCTTTATACCCTTCACCGTCGTCACGCTCC
AGTGCCTGGCGGGGATCGTGGTCACTGCCTCCCACAACGTTAAGGAGGAC
AATGGCATCAAGGTATATTGGTCGAATGGGGCTCAGGCGATGGCACCGCA
CGATCAGCGGATTCATGACTATATGATGAATAACCTAGAACCAAAGCCTT
CGTCCTGGGAAACTTCACTGGTACTTCACCATCCCGTGGTGGAGGATCCC
TATCGTCAGATATACCCACTCTTTTACGAGGCTCTCAAGACGCTTATTCC
CCCAATTTACCTGTCAGCTAATGAGTGCATGCCAGTTGAGGTTCATCTAT
ACAGCTCTTCACGGGTGTGGGGTTATCCCTTCATGTGGGAGGCCTTCTTA
CCAGGCGGCGACTCAAGCCCGGTTATTCCCGTCGTGGAACAGAAAGAGGC
CGATCCAGAGTTTCCCACCCTCCGTTAAACCAAATTCCGGAAGAAGGCAA
GGAATGCGCTGAAGCCGGCCCATAAAGAAATGGCAATGGCGAAACACCTG
CACCCTTGCTTCTGGCCAATGGATTCCGGATGGTGATTCGATTGCTG
UFO12558.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:33:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10202-RA | 2059 | CG10202-RA | 73..1081 | 8..1032 | 4510 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:33:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14818995..14819915 | 935..8 | 4185 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:33:25 has no hits.
UFO12558.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-11-02 13:58:24 Download gff for
UFO12558.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10202-RA | 68..993 | 1..935 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:01:04 Download gff for
UFO12558.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10202-RA | 68..993 | 1..935 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:05:04 Download gff for
UFO12558.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10202-RA | 68..993 | 1..935 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:05:04 Download gff for
UFO12558.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14818988..14819920 | 1..943 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:01:04 Download gff for
UFO12558.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10706493..10707425 | 1..943 | 97 | | Minus |