UFO12564.5prime Sequence
985 bp (747 high quality bases) assembled on 2012-11-02
> UFO12564.5prime
AATCGACATGATCTACTATATGCTACTCATACTGCCCGTGGTCCTGGCCC
AGGATCATCAGCGCACCACGGAATCGCTGTCCACCAAGCACCACCAGCAG
CATCAGCTGTCGCACTCGAATGCGATAATGGGTGAGGCTGGGGTCTCCAA
CTCGCAGCTAATGCAGCCCTCGACTCCGGCGCGAACCCTGCGACCCTTGA
CCGCGGGCGCGGGTGGTGACCCTTCGCTGTATGACGCCCCCGACGACTGT
CACTTCATGCCAGCAGCGGGTCTGGATCAGCCGGAAATAGCCTTAACGTG
CAACCTGCGCACGGTGAACAGCGAGTTTGACACAACCAATTTCAGTGTTA
TACCCGCCGAGCACACGATTGCCCTGCACATACTGTGCAATGACGAAATC
ATGGCCAAGAGTCGCCTGGAGGCGCAATCTTTCGCCCATCTGGTTAGGCT
CCAGCAGCTGTCCATCCAGTATTGCAAGCTGGGGCGACTGGGTCGCCAGG
TTCTGGATGGTCTGGAGCAGCTGAGGAACCTGACGCTCCGGACGCACAAC
ATCCTGTGGCCAGCGCTGAATTTCGAGATAAAAGCGGATGCCTTCTCGGT
CACTCGGAGGTTGGAGAGACTGGACCTCAGTTTGAACAACATCTGGTCCC
TGCCGGATAACATATTCTGCACCCTGTCCGAGTTGTCTGCCCTGAACATG
AGCGAGAATCGCCTGCATGACGTCAACGAGCTGGGCTTCAGGATCGCAGC
AAGGAGCCAACCAATGGTTCCACCGAATCCACCTCCACCACCGAATCGGC
AAAAAGAGCAGTAGCTCAAGCACCAGTTGTTCGCTGGACCTGGAGTACCT
GGATGTGAGCCACGATGATTTCGTCGTGCTGCCAGCAAATGATTCGCACT
CTGAGAGCTGCCAGAGCATTTCAGTCATCTAACATGACATCTCATGATGC
GACAGCTCTCATTGACTGAAAACCTGCGAATCCTG
UFO12564.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:34:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Toll-6-RC | 7624 | CG7250-RC | 534..1523 | 8..985 | 4315 | 96.7 | Plus |
| Toll-6-RB | 5746 | CG7250-RB | 534..1523 | 8..985 | 4315 | 96.7 | Plus |
| Toll-6-RA | 5517 | CG7250-RA | 534..1523 | 8..985 | 4315 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:34:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15337225..15338110 | 8..891 | 4225 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:34:46 has no hits.
UFO12564.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-11-02 13:58:32 Download gff for
UFO12564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Toll-6-RA | 516..1435 | 1..911 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:01:51 Download gff for
UFO12564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Toll-6-RA | 524..1443 | 1..911 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:05:53 Download gff for
UFO12564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Toll-6-RA | 524..1443 | 1..911 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:05:53 Download gff for
UFO12564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15337215..15338136 | 1..914 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:01:51 Download gff for
UFO12564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15330315..15331236 | 1..914 | 97 | -> | Plus |
