Clone UFO12590 Report

Search the DGRC for UFO12590

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:125
Well:90
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG31510-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO12590.5prime Sequence

763 bp (648 high quality bases) assembled on 2012-11-02

> UFO12590.5prime
AGTCGACATGAATACCAAAAACATTGAAAACAAACCCATGGATGGGACCA
AATTTCTTGATATGTTGTCAAAAATATCATTGGAGGAAATATTACAACTT
GAATTCCGTAACAATCCAACTAGCAAATGGGAAACATTGGTAACCCCCTC
ATACCCGCTTCGGAAATACAATTGTAATATTTGCCGTGTTGTTCAGTTCG
GCGACAAAAATTTGTTTAGCCACCTTAGTGGTAAAAAACATATTGCCGTA
ATGAAACTCAAAGAGCAATTGCAAATAAGAAACAAGCCCAGTGTAGCTCC
ACCCACAAAAAAGGGCCCTAACACCAATGCGAATAATAACAAAAACAGTC
AATCTCCTGCTGTTAAAAATTTGCCAATTATAAACAAAAATGTACCAAAT
CAAAATAATAATGCAAACACTAACGTTGTTAAGCAGGCAGCTGGAAATGA
AGTTGCAAAAACACAGCCGACGCAAAATAAAAAACCTGCAATGGGCGGTA
AAACGAAAAGCACTGCTACCCCTAAGGTAGTAAATAATCCAAACACTCAA
AAAAATATTCAGAATAGCACAACAAACATTCAAAAGAATGGTGCCAGAAA
AACAAGTCCAACCCAATTCAAAAAGAATAACAATTCAGGTAAAATATAAT
TACGGCCTTGTGTTTAAGAAAAAAAACACACAGGGGGAAATAAATGTGCC
ACCCCCGTGATACAAAAACACAAGGTGTTCTTTTTATGTGGGGCCCGCGG
AAAAAACACCCCC

UFO12590.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:36:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG31510-RA 4289 CG31510-RA 478..1093 8..629 2960 99 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:36:27
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25120437..25121029 601..8 2920 99.8 Minus
Blast to na_te.dros performed 2014-11-28 18:36:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\Tom 7060 Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). 617..903 327..631 113 53.3 Plus

UFO12590.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-11-02 13:58:43 Download gff for UFO12590.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31510-RA 462..1088 1..638 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:56 Download gff for UFO12590.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31510-RA 473..1099 1..638 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:06:55 Download gff for UFO12590.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31510-RA 473..1099 1..638 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:06:55 Download gff for UFO12590.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 25120408..25121034 1..638 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:56 Download gff for UFO12590.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20946130..20946756 1..638 97   Minus