Clone UT01767 Report

Search the DGRC for UT01767

Clone and Library Details

Library:UT
Tissue Source:Testis
Created by:Ling Hong
Date Registered:2002-09-12
Comments:UAS-Unpaired overexpressed in Testes from Fuller lab
Original Plate Number:17
Well:67
Vector:pOTB7
Associated Gene/Transcriptlig3-RA
Protein status:UT01767.pep: gold
Sequenced Size:2591

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
lig3-RA 2009-06-22 Replacement based on scoring

Clone Sequence Records

UT01767.complete Sequence

2591 bp assembled on 2010-01-05

GenBank Submission: BT120103.1

> UT01767.complete
GTCGAAAGTCTGTTTGCATTGTTCTGTGAAATAGACAACCACATTTTTAA
TTTGCAATTAGTGTGCGTATGCTATTGTCCAGGCTAACGTGGCAGGCCAG
GATTCTAACTCGTCTTCTGTGTAATAAGATGGCCAGCAAGGGATTGCACA
ATGAGGACAACAAGTTGGACACTTTCCGTCGCATCTGTGATGAAATTGCC
GGCGAGTCAAGTTACCTGAAGAAAGCGGAGAGACTGCAGCGATTCTTCGA
AAAGGGGAGCAGTGGCAAGGGCTTCAAGGGCGACACCGTGCTCTGGGTGC
AGTTCCTCATTCCGGCGGCCAATCAGCGCGTCTACAATCTGCAGAACAAG
GCGCTGATCAAACTCTTTTCGCGCATTTTTAATGCAGATCAACAGCAAAT
GCATCTGGATCTAGAGCAGGATGGCGACGTTTCGGAAACTCTACGCAAGC
ACTTTGCTGCTTCTAAGAAACTCAAGCCGCAAAAGCAGAGCAAACTCTAT
CTGCAGGAGGTGGAGGAAATGCTCCTGCACCTGGTGGAGCGTACCAAAGA
GGATGAGCAAACAGATCTGCTACAGAAGTTGTGCTCGAAGGCCACTGACC
TGGATCTGCGCACCTTTATTCGCTTGGTGAAGCACGACTTAAGAATCAAT
GCCCGAGCCCGGCACATCCTGGATGCTTTTGGTCCTGATGCCTACCCCGC
ATATCAGTCTTCCCGCGATTTGGTGGCAATTGTCGAACAGTTTGCCACCA
AAGAAAATAAAAATTATGCTAGTAGTCCCGTTAAGAAGACTAAGAAAACG
AGCTCGAGTGCAATTCAGGTAATGACACCCATATCGCCCATGTTGGCCAG
TCCCTGCAAGTCGGTGGAGGACGCCTTCAAGAAGAGCCCCACTGGACTAT
ATAGCGAGATCAAATACGATGGAGAGCGAGTTCAAATCCACAAGCAGGGC
AACGACTTCAAGTTCTTTAGTCGCAATCTAAAGCCTGTGGTGGATCACAA
GATACGGGCTCTGAAAAAATATATTCCGCAAGCCTTTCCTGGCGGTGGCG
AAATGATACTGGACTCTGAGATCATTCTGGTCGACACTGACACAGGAGCA
CTGCTGCCCTTTGGTTCGTTGGGTGCCCATAAGAAGCAGACTTTCGCCAA
TGCTGCTGTATGCTTATTCGTCTTCGATTGCATACTGTATGATGGCGAGG
ATTTGACCCAGCTGCCATTTCGCAAGCGTCGCGAGATTCTTGAGCAGAAT
ATTCAACCCATTAAATCCCACGTGCAGCTGTCGGAGTCGGAGTTCCTCAA
GACCACGAGGGAACTGGCCGCGATGACGGCCAGGGTGTTACATGCCAATC
TGGAGGGTGTGGTCCTAAAGAGTCCAACCAGCACATATCAGCCCGGCAAA
AGGAACTGGCTTAAGGTCAAGAAGGATTACCTATTCGACGGAAAGATGGC
TGACACCGCGGACTTGGTTGTTTTGGGTGCTTGGTACGGATCAGGGAAGA
AAGGTGGCACGCTTAGTATTTTTCTCATGGGCTGCTACGATGCGTTTGGG
CGTTTGTGGAAGACAGTGACCAAAGTGCACTCTGGCTTGGATGATGCTAC
CAACGCAGAGGTACATAAATCACTAATCAAACTAACCGAACGTGCTGATG
CCAACGCAATTCCCAGTTGGCTGTTATGCAGTAAGTCCCTTGTACCAGAT
GTACTGGCCAAGGATCCGATGAAAATGCCAGTATGGGAGATTACTGGCGC
AGAGTTCACCAAGTCCGATGCCCATACCGCGTCTGGAATCTCAGTACGAT
TTCCCAGGATTACTCGTCGTCGCAGTGATAAATCAGCCAAAGAGGCCAAT
GATCTGGCCCATCTAGAAGATCTTTTCGAGGCCTCAAAATCGAATGTAAA
TGTTGATTTACTTCTGGCCAATTGTAGTAAAGATGAGACAGCAATGAATA
ACAAAACAACTCCTGAAAAGGAGAAAAAACTGAATGGCAATCAATCAAAT
GGTAGTAAGAAATTGAAAAGGTCCAATACTGGTTCTGATGACGAAGACGG
AGCTCCTGTGCTCAGCAAACGCAAGGAGTCCAAAGCGATTCGAAGCTTGT
CCCCTTCGCAAAAGGGATTAAAGGATTTTTTTAAGCCCAGCAAGGAGTTT
AAATCAGTTGTGAAAAAGGAACCAAAGGAGGATGAAGGCAATATTGAATC
CACTAGCTCGAAACCCCAGTTGTTCGAAGGATTGGTGGCACACTTTGCCA
TGGAGAAGGATTCAAGTAAACTGATGCAGCAGTTTTCACAGCATGGAGGA
TGCTGTACAACAGAACCACAAAAAGCTGATCTGGTCTTTTATGCGAATAC
GAACGAGGCATTGGACCTAGAGAAGCTTAGAACGCTCTATCGTCGTAGCT
GCCGGCACTTGAATGTAAGCTGGCTCCAAAGCTGTCTCGATACTCAGAGT
CGTCAACCTTTTCCCCTACACGCCGTGATGATGAAATGATGAGTGGTATT
CTAAATCGTTTGCACTCAGAAATTTGTACATGCTTGATTAAACCGAACAC
ACATACATATGTGTGTATTATTGAAAAAAAAAAAAAAAAAA

UT01767.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:06:27
Subject Length Description Subject Range Query Range Score Percent Strand
lig3-RA 2650 lig3-RA 1..2574 1..2574 12870 100 Plus
lig3.a 2533 lig3.a 20..2532 62..2574 12565 100 Plus
Cyp9f2-RA 1976 Cyp9f2-RA 93..186 2443..2536 335 90.4 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:14:04
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 8224660..8225826 2380..1214 5835 100 Minus
chr3R 27901430 chr3R 8225914..8226708 1214..420 3975 100 Minus
chr3R 27901430 chr3R 8226782..8227201 420..1 2100 100 Minus
chr3R 27901430 chr3R 8224404..8224600 2573..2377 985 100 Minus
chr3R 27901430 chr3R 8231445..8231538 2536..2443 335 90.4 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 22:00:03 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:14:02
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12399272..12400438 2380..1214 5835 100 Minus
3R 32079331 3R 12400526..12401320 1214..420 3975 100 Minus
3R 32079331 3R 12401394..12401813 420..1 2100 100 Minus
3R 32079331 3R 12399015..12399212 2574..2377 990 100 Minus
3R 32079331 3R 12406056..12406149 2536..2443 335 90.4 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:01:03
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 12140103..12141269 2380..1214 5835 100 Minus
3R 31820162 3R 12141357..12142151 1214..420 3975 100 Minus
3R 31820162 3R 12142225..12142644 420..1 2100 100 Minus
3R 31820162 3R 12139846..12140043 2574..2377 990 100 Minus
3R 31820162 3R 12146887..12146980 2536..2443 335 90.4 Minus
Blast to na_te.dros performed 2019-03-15 17:14:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dm88 4558 Dm88 DM88 4558bp 1897..1955 2141..2197 119 69.5 Plus

UT01767.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:15:14 Download gff for UT01767.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 8224404..8224596 2381..2573 100 <- Minus
chr3R 8224660..8225826 1214..2380 100 <- Minus
chr3R 8225915..8226707 421..1213 100 <- Minus
chr3R 8226782..8227201 1..420 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-01-05 11:21:48 Download gff for UT01767.complete
Subject Subject Range Query Range Percent Splice Strand
lig3-RA 1..2421 69..2489 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:07:21 Download gff for UT01767.complete
Subject Subject Range Query Range Percent Splice Strand
lig3-RA 1..2421 69..2489 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:29:05 Download gff for UT01767.complete
Subject Subject Range Query Range Percent Splice Strand
lig3-RA 1..2421 69..2489 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:29:28 Download gff for UT01767.complete
Subject Subject Range Query Range Percent Splice Strand
lig3-RA 1..2421 69..2489 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-01-05 11:21:47 Download gff for UT01767.complete
Subject Subject Range Query Range Percent Splice Strand
lig3-RA 1..2573 1..2573 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:07:21 Download gff for UT01767.complete
Subject Subject Range Query Range Percent Splice Strand
lig3-RA 1..2573 1..2573 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:29:05 Download gff for UT01767.complete
Subject Subject Range Query Range Percent Splice Strand
lig3-RA 27..2599 1..2573 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:29:28 Download gff for UT01767.complete
Subject Subject Range Query Range Percent Splice Strand
lig3-RA 27..2599 1..2573 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:15:14 Download gff for UT01767.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12399016..12399208 2381..2573 100 <- Minus
3R 12399272..12400438 1214..2380 100 <- Minus
3R 12400527..12401319 421..1213 100 <- Minus
3R 12401394..12401813 1..420 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:15:14 Download gff for UT01767.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12399016..12399208 2381..2573 100 <- Minus
3R 12399272..12400438 1214..2380 100 <- Minus
3R 12400527..12401319 421..1213 100 <- Minus
3R 12401394..12401813 1..420 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:15:14 Download gff for UT01767.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12399016..12399208 2381..2573 100 <- Minus
3R 12399272..12400438 1214..2380 100 <- Minus
3R 12400527..12401319 421..1213 100 <- Minus
3R 12401394..12401813 1..420 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:29:05 Download gff for UT01767.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8224738..8224930 2381..2573 100 <- Minus
arm_3R 8224994..8226160 1214..2380 100 <- Minus
arm_3R 8226249..8227041 421..1213 100 <- Minus
arm_3R 8227116..8227535 1..420 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:40:33 Download gff for UT01767.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12139847..12140039 2381..2573 100 <- Minus
3R 12140103..12141269 1214..2380 100 <- Minus
3R 12141358..12142150 421..1213 100 <- Minus
3R 12142225..12142644 1..420 100   Minus

UT01767.hyp Sequence

Translation from 68 to 2488

> UT01767.hyp
MLLSRLTWQARILTRLLCNKMASKGLHNEDNKLDTFRRICDEIAGESSYL
KKAERLQRFFEKGSSGKGFKGDTVLWVQFLIPAANQRVYNLQNKALIKLF
SRIFNADQQQMHLDLEQDGDVSETLRKHFAASKKLKPQKQSKLYLQEVEE
MLLHLVERTKEDEQTDLLQKLCSKATDLDLRTFIRLVKHDLRINARARHI
LDAFGPDAYPAYQSSRDLVAIVEQFATKENKNYASSPVKKTKKTSSSAIQ
VMTPISPMLASPCKSVEDAFKKSPTGLYSEIKYDGERVQIHKQGNDFKFF
SRNLKPVVDHKIRALKKYIPQAFPGGGEMILDSEIILVDTDTGALLPFGS
LGAHKKQTFANAAVCLFVFDCILYDGEDLTQLPFRKRREILEQNIQPIKS
HVQLSESEFLKTTRELAAMTARVLHANLEGVVLKSPTSTYQPGKRNWLKV
KKDYLFDGKMADTADLVVLGAWYGSGKKGGTLSIFLMGCYDAFGRLWKTV
TKVHSGLDDATNAEVHKSLIKLTERADANAIPSWLLCSKSLVPDVLAKDP
MKMPVWEITGAEFTKSDAHTASGISVRFPRITRRRSDKSAKEANDLAHLE
DLFEASKSNVNVDLLLANCSKDETAMNNKTTPEKEKKLNGNQSNGSKKLK
RSNTGSDDEDGAPVLSKRKESKAIRSLSPSQKGLKDFFKPSKEFKSVVKK
EPKEDEGNIESTSSKPQLFEGLVAHFAMEKDSSKLMQQFSQHGGCCTTEP
QKADLVFYANTNEALDLEKLRTLYRRSCRHLNVSWLQSCLDTQSRQPFPL
HAVMMK*

UT01767.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:23:40
Subject Length Description Subject Range Query Range Score Percent Strand
lig3-PA 806 CG17227-PA 1..806 1..806 4151 100 Plus
DNA-ligI-PA 747 CG5602-PA 366..733 254..609 400 30.3 Plus
Lig4-PA 918 CG12176-PA 70..646 77..642 251 23.8 Plus

UT01767.pep Sequence

Translation from 68 to 2488

> UT01767.pep
MLLSRLTWQARILTRLLCNKMASKGLHNEDNKLDTFRRICDEIAGESSYL
KKAERLQRFFEKGSSGKGFKGDTVLWVQFLIPAANQRVYNLQNKALIKLF
SRIFNADQQQMHLDLEQDGDVSETLRKHFAASKKLKPQKQSKLYLQEVEE
MLLHLVERTKEDEQTDLLQKLCSKATDLDLRTFIRLVKHDLRINARARHI
LDAFGPDAYPAYQSSRDLVAIVEQFATKENKNYASSPVKKTKKTSSSAIQ
VMTPISPMLASPCKSVEDAFKKSPTGLYSEIKYDGERVQIHKQGNDFKFF
SRNLKPVVDHKIRALKKYIPQAFPGGGEMILDSEIILVDTDTGALLPFGS
LGAHKKQTFANAAVCLFVFDCILYDGEDLTQLPFRKRREILEQNIQPIKS
HVQLSESEFLKTTRELAAMTARVLHANLEGVVLKSPTSTYQPGKRNWLKV
KKDYLFDGKMADTADLVVLGAWYGSGKKGGTLSIFLMGCYDAFGRLWKTV
TKVHSGLDDATNAEVHKSLIKLTERADANAIPSWLLCSKSLVPDVLAKDP
MKMPVWEITGAEFTKSDAHTASGISVRFPRITRRRSDKSAKEANDLAHLE
DLFEASKSNVNVDLLLANCSKDETAMNNKTTPEKEKKLNGNQSNGSKKLK
RSNTGSDDEDGAPVLSKRKESKAIRSLSPSQKGLKDFFKPSKEFKSVVKK
EPKEDEGNIESTSSKPQLFEGLVAHFAMEKDSSKLMQQFSQHGGCCTTEP
QKADLVFYANTNEALDLEKLRTLYRRSCRHLNVSWLQSCLDTQSRQPFPL
HAVMMK*

UT01767.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:19:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17047-PA 788 GF17047-PA 10..787 9..806 3164 77.3 Plus
Dana\GF12871-PA 749 GF12871-PA 368..725 254..599 430 31.1 Plus
Dana\GF21760-PA 924 GF21760-PA 11..620 36..605 243 23.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:19:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17130-PA 805 GG17130-PA 1..805 1..806 3905 90.1 Plus
Dere\GG22898-PA 747 GG22898-PA 366..733 254..609 417 30.3 Plus
Dere\GG19495-PA 927 GG19495-PA 70..642 77..638 250 24 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 20:19:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20153-PA 799 GH20153-PA 1..798 21..806 2871 69.1 Plus
Dgri\GH20192-PA 674 GH20192-PA 293..660 254..609 428 31.7 Plus
Dgri\GH11911-PA 922 GH11911-PA 68..650 77..644 256 24.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:24:47
Subject Length Description Subject Range Query Range Score Percent Strand
DNAlig3-PA 806 CG17227-PA 1..806 1..806 4151 100 Plus
DNAlig1-PA 747 CG5602-PA 366..733 254..609 400 30.3 Plus
DNAlig4-PA 918 CG12176-PA 70..646 77..642 251 23.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 20:19:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24375-PA 793 GI24375-PA 1..792 21..806 2849 69.1 Plus
Dmoj\GI20719-PA 736 GI20719-PA 355..715 254..605 425 31.1 Plus
Dmoj\GI15517-PA 926 GI15517-PA 75..658 77..639 251 24.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:19:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27179-PA 788 GL27179-PA 1..787 21..806 3161 75.7 Plus
Dper\GL11174-PA 744 GL11174-PA 363..730 254..609 431 31.1 Plus
Dper\GL22420-PA 916 GL22420-PA 68..615 77..606 275 25 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:19:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26759-PA 788 GA26759-PA 1..787 21..806 3143 75.5 Plus
Dpse\GA18999-PA 744 GA18999-PA 363..720 254..599 429 31.4 Plus
Dpse\GA11455-PA 916 GA11455-PA 68..615 77..606 274 25 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:19:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26013-PA 783 GM26013-PA 1..783 21..806 3897 93 Plus
Dsec\GM16058-PA 747 GM16058-PA 366..733 254..609 413 30.3 Plus
Dsec\GM13668-PA 656 GM13668-PA 353..632 330..599 340 30.4 Plus
Dsec\GM17599-PA 671 GM17599-PA 22..525 141..638 244 24.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:19:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20571-PA 362 GD20571-PA 1..362 21..382 1819 94.5 Plus
Dsim\GD11806-PA 713 GD11806-PA 332..699 254..609 413 30.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 20:19:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24382-PA 818 GJ24382-PA 13..817 13..806 2826 68 Plus
Dvir\GJ20456-PA 667 GJ20456-PA 286..643 254..599 423 31.6 Plus
Dvir\GJ19276-PA 992 GJ19276-PA 68..649 77..644 265 24.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 20:19:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11194-PA 796 GK11194-PA 5..795 26..806 2922 70 Plus
Dwil\GK15713-PA 744 GK15713-PA 363..723 254..605 426 31 Plus
Dwil\GK10206-PA 935 GK10206-PA 76..659 77..638 266 24.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:19:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24522-PA 785 GE24522-PA 1..785 21..806 3803 90.1 Plus
Dyak\GE14336-PA 747 GE14336-PA 366..733 254..609 409 30.3 Plus
Dyak\GE16147-PA 918 GE16147-PA 70..642 77..638 258 24.3 Plus