Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
UT01871.complete Sequence
882 bp (882 high quality bases) assembled on 2004-01-31
GenBank Submission: BT011512
> UT01871.complete
CTCGGCGCCATATCAGATAAGTTTTACTATGGAAATAGGAGAGCGTGGAA
ATGGAGAACAGGAGGTGCACCGTCGTTGCCGTGGGTGACCTTGTGGATGA
GCTTGGCTTCTGTTGCGAGTGGTGTGGCAAGGTGTACAAGAGTCTTGTCC
GCTACCACAACCACATTGTATGCACCCACAAGTTACCTGTTCCGGATCAC
CAGTTGGTCAACTGCTTCCACTGTCCACGCAGCGATTGCAGATTCCACAA
GCATGGACCCGGAGTACAGAATTTTCGGCAAATTGGAAGGCTCCGCCGCC
ACTACCAGGAGAAGCACATGACAGGACACCTTACGTGCGAGTACTGCCAG
AAGCAGTTTCAACTGAAGTCAGCGCTGGTGGCCCACAGATGTCGGCTGAG
GCATCCAGCCATCAGGGATAGTCAGTCCGCCATCACTTTGGGGAGGCATG
TGTGCAAAAAAGGCTACACGCATCTGGGCGCCCTACAACGGCGCCTCACC
TGCTGCCAGCATGGAACACCAAATACTCCGACGGAGGACCAGAAGGATAT
AAGGGACACGGTGTGTCTGCAATGCAACAAGGAATATGTTGACACCCATC
GCTGTTGTGTACGAACCGAGCGAAGCTTTCAGTCTGACCGTCTCATCTTC
AGAAAGTCTAGTCAGGAGACCCACGGTAAATCCAGGTACCTGCAGGCGGA
AGACTGGCGCTTTCTGTTTGAAATGGAGCAGCTTGTCCGCGGCATTGACG
ACGGGCTTGTGCGGGACCCTTTGTTGCTCACGGAACTCGCCTCTCTGGTG
CCGGTGCTTCAGCAAATCCAGGATTCTGATTTAGAAATAAAGTGACATTA
TTTGTAACGACCAAAAAAAAAAAAAAAAAAAA
UT01871.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 18:05:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14451-RA | 795 | CG14451-RA | 1..795 | 51..845 | 3975 | 100 | Plus |
mael.d | 1940 | mael.d | 1..69 | 255..187 | 345 | 100 | Minus |
mael.e | 1940 | mael.e | 1..69 | 758..690 | 345 | 100 | Minus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 19:55:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 22710133..22710994 | 862..1 | 4310 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 22:00:04 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 19:55:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22721227..22722091 | 865..1 | 4325 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:52:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 22714327..22715191 | 865..1 | 4325 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 19:55:19 has no hits.
UT01871.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 19:56:29 Download gff for
UT01871.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 22710133..22710994 | 1..862 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 21:12:11 Download gff for
UT01871.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14451-RA | 1..795 | 51..845 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:40:28 Download gff for
UT01871.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14451-RA | 1..795 | 51..845 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:00:49 Download gff for
UT01871.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14451-RA | 1..795 | 51..845 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:29:19 Download gff for
UT01871.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14451-RA | 1..795 | 51..845 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:45:34 Download gff for
UT01871.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14451-RA | 1..795 | 51..845 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:49:26 Download gff for
UT01871.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14451-RA | 1..795 | 51..845 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:40:28 Download gff for
UT01871.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14451-RA | 1..862 | 1..862 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:00:49 Download gff for
UT01871.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14451-RA | 1..862 | 1..862 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:29:19 Download gff for
UT01871.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14451-RA | 1..795 | 51..845 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:45:34 Download gff for
UT01871.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14451-RA | 1..862 | 1..862 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:56:29 Download gff for
UT01871.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22721230..22722091 | 1..862 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:56:29 Download gff for
UT01871.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22721230..22722091 | 1..862 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:56:29 Download gff for
UT01871.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22721230..22722091 | 1..862 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:00:49 Download gff for
UT01871.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22714330..22715191 | 1..862 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:01:42 Download gff for
UT01871.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22714330..22715191 | 1..862 | 100 | | Minus |
UT01871.pep Sequence
Translation from 50 to 844
> UT01871.pep
MENRRCTVVAVGDLVDELGFCCEWCGKVYKSLVRYHNHIVCTHKLPVPDH
QLVNCFHCPRSDCRFHKHGPGVQNFRQIGRLRRHYQEKHMTGHLTCEYCQ
KQFQLKSALVAHRCRLRHPAIRDSQSAITLGRHVCKKGYTHLGALQRRLT
CCQHGTPNTPTEDQKDIRDTVCLQCNKEYVDTHRCCVRTERSFQSDRLIF
RKSSQETHGKSRYLQAEDWRFLFEMEQLVRGIDDGLVRDPLLLTELASLV
PVLQQIQDSDLEIK*
UT01871.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:43:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG13173-PA | 257 | GG13173-PA | 1..257 | 1..264 | 888 | 68.7 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:15:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14451-PA | 264 | CG14451-PA | 1..264 | 1..264 | 1457 | 100 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:43:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI11512-PA | 245 | GI11512-PA | 15..244 | 11..257 | 196 | 24.4 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:43:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL11673-PA | 202 | GL11673-PA | 13..193 | 81..259 | 149 | 27.1 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:43:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA24232-PA | 295 | GA24232-PA | 10..286 | 3..259 | 244 | 26.8 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:43:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM22083-PA | 256 | GM22083-PA | 1..256 | 1..264 | 1144 | 82.8 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:43:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD12058-PA | 252 | GD12058-PA | 1..252 | 1..264 | 1112 | 81.6 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:43:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE19494-PA | 269 | GE19494-PA | 1..269 | 1..264 | 924 | 71 | Plus |
UT01871.hyp Sequence
Translation from 50 to 844
> UT01871.hyp
MENRRCTVVAVGDLVDELGFCCEWCGKVYKSLVRYHNHIVCTHKLPVPDH
QLVNCFHCPRSDCRFHKHGPGVQNFRQIGRLRRHYQEKHMTGHLTCEYCQ
KQFQLKSALVAHRCRLRHPAIRDSQSAITLGRHVCKKGYTHLGALQRRLT
CCQHGTPNTPTEDQKDIRDTVCLQCNKEYVDTHRCCVRTERSFQSDRLIF
RKSSQETHGKSRYLQAEDWRFLFEMEQLVRGIDDGLVRDPLLLTELASLV
PVLQQIQDSDLEIK*
UT01871.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:40:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14451-PA | 264 | CG14451-PA | 1..264 | 1..264 | 1457 | 100 | Plus |