Clone BO26706 Report

Search the DGRC for BO26706

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:267
Well:6
Vector:pDNR-Dual
Associated Gene/TranscriptOgg1-RA
Protein status:BO26706.pep: Imported from assembly
Sequenced Size:1063

Clone Sequence Records

BO26706.complete Sequence

1063 bp assembled on 2010-08-18

GenBank Submission: KX796654

> BO26706.complete
GAAGTTATCAGTCGACATGCTGGCTCATAACCTAGGTTTCCATAAAAAGC
GCCTTTTTTCAAACATGAAGGCTGTTTTACAGGATCGGGGTGTCATAGGC
TTATCCCTCGAAGAATGCGATTTGGAAAGAACTTTGCTTGGAGGACAGAG
TTTCCGATGGCGATCCATATGCGATGGTAATAGAACGAAATATGGCGGAG
TGGTGTTCAACACCTACTGGGTGCTCCAGCAAGAAGAATCCTTCATAACT
TACGAGGCATACGGAACCAGCAGTCCTTTGGCCACGAAGGACTATTCTTC
CTTGATATCTGACTACCTACGTGTTGATTTCGACCTAAAGGTCAACCAAA
AAGATTGGTTAAGCAAAGATGATAACTTTGTGAAGTTCTTGAGTAAGCCT
GTGCGCCTCCTTTCTCAGGAGCCGTTCGAAAACATTTTTAGCTTCCTTTG
CAGTCAGAACAATAACATCAAGCGCATATCATCTATGATTGAATGGTTTT
GCGCTACATTTGGCACCAAGATTGGTCACTTCAATGGTGCCGATGCGTAT
ACATTTCCCACGATAAATAGATTCCACGACATCCCATGCGAGGATCTTAA
TGCCCAGCTAAGGGCTGCCAAGTTCGGTTATCGGGCCAAGTTCATAGCAC
AAACGCTGCAAGAGATCCAGAAAAAGGGGGGACAAAACTGGTTCATAAGC
CTAAAGAGCATGCCGTTCGAAAAAGCTCGCGAGGAGCTGACACTGCTACC
CGGAATCGGATACAAAGTGGCCGATTGCATCTGCCTTATGTCAATGGGTC
ACTTGGAGTCAGTGCCCGTCGACATTCATATTTACAGAATTGCCCAAAAT
TACTACCTGCCACATCTAACCGGCCAAAAGAACGTAACCAAGAAGATTTA
CGAAGAGGTCTCGAAACATTTTCAAAAGCTACACGGAAAGTATGCCGGTT
GGGCTCAAGCTATTCTCTTTTCTGCCGATTTGAGTCAATTTCAAAATACT
TCCACAGTTGCTTGTAAGAAAAAATCCAATAAAAAACCTAAAAAGGCAAG
CTTTCTAGACCAT

BO26706.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:55:51
Subject Length Description Subject Range Query Range Score Percent Strand
Ogg1-RA 1032 CG1795-PA 1..1029 17..1045 5145 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:55:52
Subject Length Description Subject Range Query Range Score Percent Strand
Ogg1-RA 1307 CG1795-RA 162..1190 17..1045 5145 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:55:49
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8691064..8691551 474..961 2440 100 Plus
X 23542271 X 8690685..8691003 156..474 1595 100 Plus
X 23542271 X 8690488..8690627 17..156 700 100 Plus
X 23542271 X 8691611..8691694 962..1045 420 100 Plus
Blast to na_te.dros performed on 2014-11-28 08:55:50 has no hits.

BO26706.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:52:47 Download gff for BO26706.complete
Subject Subject Range Query Range Percent Splice Strand
Ogg1-RA 160..1188 17..1047 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:52 Download gff for BO26706.complete
Subject Subject Range Query Range Percent Splice Strand
Ogg1-RA 162..1190 17..1047 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:27:38 Download gff for BO26706.complete
Subject Subject Range Query Range Percent Splice Strand
Ogg1-RA 162..1190 17..1047 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:27:38 Download gff for BO26706.complete
Subject Subject Range Query Range Percent Splice Strand
X 8691611..8691694 962..1047 97   Plus
X 8691065..8691551 475..961 100 -> Plus
X 8690686..8691003 157..474 100 -> Plus
X 8690488..8690627 17..156 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:52 Download gff for BO26706.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 8585644..8585727 962..1047 97   Plus
arm_X 8585098..8585584 475..961 100 -> Plus
arm_X 8584719..8585036 157..474 100 -> Plus
arm_X 8584521..8584660 17..156 100 -> Plus

BO26706.pep Sequence

Translation from 16 to 1063

> BO26706.pep
MLAHNLGFHKKRLFSNMKAVLQDRGVIGLSLEECDLERTLLGGQSFRWRS
ICDGNRTKYGGVVFNTYWVLQQEESFITYEAYGTSSPLATKDYSSLISDY
LRVDFDLKVNQKDWLSKDDNFVKFLSKPVRLLSQEPFENIFSFLCSQNNN
IKRISSMIEWFCATFGTKIGHFNGADAYTFPTINRFHDIPCEDLNAQLRA
AKFGYRAKFIAQTLQEIQKKGGQNWFISLKSMPFEKAREELTLLPGIGYK
VADCICLMSMGHLESVPVDIHIYRIAQNYYLPHLTGQKNVTKKIYEEVSK
HFQKLHGKYAGWAQAILFSADLSQFQNTSTVACKKKSNKKPKKASFLDH

BO26706.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:22:43
Subject Length Description Subject Range Query Range Score Percent Strand
Ogg1-PA 343 CG1795-PA 1..343 1..343 1821 100 Plus