Clone BO28735 Report

Search the DGRC for BO28735

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:287
Well:35
Vector:pDNR-Dual
Associated Gene/TranscriptCG32548-RB
Protein status:BO28735.pep: Imported from assembly
Sequenced Size:1189

Clone Sequence Records

BO28735.complete Sequence

1189 bp assembled on 2011-08-24

GenBank Submission: KX799269

> BO28735.complete
GAAGTTATCAGTCGACATGTTCGCATTGGCCTTGACGGTGGCGGCCTTGG
TGCTTGCCGGCCAGCAGGAGGTGTGCCGCGCACAGGTCTCCATCCACACG
GACGCCAACTCGAACTCCTACAGCCTGAAGACGCCCGGAGTGCAGCAGAC
CTTCACCCGGTACTACGGAGGAGCGGCCAAGAACCAGCAGGTGGAGCAGC
CGCAGCTGCAGCAGCCGCAGGAGCAGGAGCAGTTGCAAACTCCCACGCAA
TTTGGTGGATTCTCGCCGTCGGGACAGCAGTATCCTGCCGTGTACTCGCA
GCCAGGATTCCGGGCCGATGGTAAGCTGAAGGTCACGCCCAACTCGCTGC
TCCAGCAGCAGCAACAGCAGCAACAGCAGCAACAGCAGCAACAGCAGCAA
CAGCAGCAACAGCAGCAACAGCAGCTCCTGGCGCAGCAGCAGCAGCAACT
CCTGGCCGCCACATCGCCGCAGGTAGCAGCTGCATCCGGACCAGGAGTGG
GCGTTAGCGGTGGCGTGGTCAACATGCCCAGCTATGCGGACCAGATGCAC
GCCGCCTTCCTCGATTATCAGCGCCAACGAGCCGAGTTCGAGCAGCAGCA
GCAGCACCTGCTGCAGAAGCTCTACCACTACTATCCCGATGTATCCGGCG
GCCTAACATCACCGGCTCATCAGATTCAACCCCAAACCCCCCAGATAGCT
GCTCCCGCCGATGTGGGAGGCGCTCCGGCGGGCGTGGCAGCACAGAACGC
AGCTGGCCGCTTCGCCTACCGTCGGCCGCAGTTCAGCAACAATGGCCTGC
AGCCCGAGCGCCTTGCATCCGGATCCATTGTGCCCGGAGGTCCAGTAAGA
GGAGGTCCAGTTGGAGTCATCCCGGGAGGAGTGATCGGATCAGCGCCTTT
GCGCTCCAACAGTCTGGGAGGGGGAGCAAGTGGAGACTTCTACTCCACGC
AACAGCACATGGGCTTCATGCAGCAGCAGCAGCAGGACGTGCTCCGTGAC
CAGCAGCAGTCGGTGGCCCATCAGTTCGCCACCAGCCAGTTGGCGCCCAC
CACCCGCCAGAGCTATGGGATGGCCGTTCCCATGTCCTCCGTGCTGGGAT
CCCCCACCTACCAGCAATCGCCGGACGTCTCTCATGTGAGCTTCTCAAGC
GGCAATCTCAACTACAGCTTCGCAAGCTTTCTAGACCAT

BO28735.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:39:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG32548-RB 1158 CG32548-PB 1..1155 17..1171 5775 100 Plus
CG32548-RC 1065 CG32548-PC 127..1062 236..1171 4680 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:39:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG32548-RB 1475 CG32548-RB 173..1328 16..1171 5780 100 Plus
CG32548-RC 1382 CG32548-RC 300..1235 236..1171 4680 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:39:43
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18435866..18436802 1171..235 4685 100 Minus
X 23542271 X 18440190..18440409 235..16 1100 100 Minus
Blast to na_te.dros performed on 2014-11-27 06:39:44 has no hits.

BO28735.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:34:29 Download gff for BO28735.complete
Subject Subject Range Query Range Percent Splice Strand
CG32548-RB 179..1328 22..1173 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:50:03 Download gff for BO28735.complete
Subject Subject Range Query Range Percent Splice Strand
CG32548-RB 179..1328 22..1173 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:51:04 Download gff for BO28735.complete
Subject Subject Range Query Range Percent Splice Strand
CG32548-RB 179..1328 22..1173 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:51:04 Download gff for BO28735.complete
Subject Subject Range Query Range Percent Splice Strand
X 18440190..18440403 22..235 100   Minus
X 18435864..18436801 236..1173 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:50:03 Download gff for BO28735.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 18334223..18334436 22..235 100   Minus
arm_X 18329897..18330834 236..1173 99 <- Minus

BO28735.pep Sequence

Translation from 16 to 1189

> BO28735.pep
MFALALTVAALVLAGQQEVCRAQVSIHTDANSNSYSLKTPGVQQTFTRYY
GGAAKNQQVEQPQLQQPQEQEQLQTPTQFGGFSPSGQQYPAVYSQPGFRA
DGKLKVTPNSLLQQQQQQQQQQQQQQQQQQQQQQQQLLAQQQQQLLAATS
PQVAAASGPGVGVSGGVVNMPSYADQMHAAFLDYQRQRAEFEQQQQHLLQ
KLYHYYPDVSGGLTSPAHQIQPQTPQIAAPADVGGAPAGVAAQNAAGRFA
YRRPQFSNNGLQPERLASGSIVPGGPVRGGPVGVIPGGVIGSAPLRSNSL
GGGASGDFYSTQQHMGFMQQQQQDVLRDQQQSVAHQFATSQLAPTTRQSY
GMAVPMSSVLGSPTYQQSPDVSHVSFSSGNLNYSFASFLDH

BO28735.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:21:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG32548-PB 385 CG32548-PB 1..385 1..385 1979 100 Plus
CG32548-PC 354 CG32548-PC 43..354 74..385 1612 100 Plus
Atx2-PA 888 CG5166-PA 471..797 27..315 201 28.6 Plus
Atx2-PD 1023 CG5166-PD 471..797 27..315 201 28.6 Plus
Atx2-PC 1023 CG5166-PC 471..797 27..315 201 28.6 Plus